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View Structure Prediction Details

Protein: gi|21555114, gi|...
Organism: Arabidopsis thaliana
Length: 89 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21555114, gi|....

Description E-value Query
Range
Subject
Range
gi|18402825, gi|... - gi|21554633|gb|AAM63640.1| unknown [Arabidopsis thaliana], gi|20453363|gb|AAM19920.1| At2g31940/F20M...
111.0 [0..1] [69..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSFEGMLM KVSIFALIQG LVYLILSKSS SVFSTSKTMK RAYSFRSARS ISIRRILAVL  60
   61 QDMPAGGEMS PSAMGPSLAS SLSSPSEII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.701 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.527 a.159.2 FF domain
View Download 0.521 a.144.1 PABC (PABP) domain
View Download 0.518 a.4.1 Homeodomain-like
View Download 0.514 a.159.1 Protein serine/threonine phosphatase 2C, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle