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View Structure Prediction Details

Protein: ACDH_ARATH
Organism: Arabidopsis thaliana
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACDH_ARATH.

Description E-value Query
Range
Subject
Range
PKHA8_RAT - Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus GN=Plekha8 PE=1 SV=1
248.0 [0..2] [228..277]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF  60
   61 CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE TLHNILDLDV EKETVKTPGS 120
  121 HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT 180
  181 LPTRDQLLLR LNETDQSVEK NMRRYMEASR PIIEYIDKLY IERNIKLDW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 1swxA
Description: Crystal structure of a human glycolipid transfer protein in apo-form
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle