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View Structure Prediction Details

Protein: gi|7494192
Organism: Plasmodium falciparum
Length: 699 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494192.

Description E-value Query
Range
Subject
Range
gi|16660617 - gi|16660617|gb|AAL27607.1|AF429950_1 PDZ domain protein [Plasmodium falciparum]
467.0 [0..1] [699..1]
gi|56498868 - gi|56498868|emb|CAH95898.1| PDZ domain protein, putative [Plasmodium berghei]
gi|68072989 - gi|68072989|ref|XP_678409.1| PDZ domain protein [Plasmodium berghei strain ANKA]
327.0 [0..250] [697..155]
gi|83282447 - gi|83282447|ref|XP_729775.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23488518 - gi|23488518|gb|EAA21340.1| PDZ domain protein [Plasmodium yoelii yoelii]
327.0 [0..194] [697..115]
gi|70942414 - gi|70942414|ref|XP_741376.1| PDZ domain protein [Plasmodium chabaudi chabaudi]
gi|56519717 - gi|56519717|emb|CAH78195.1| PDZ domain protein, putative [Plasmodium chabaudi chabaudi]
183.0 [0..237] [555..155]
gi|124505617, gi... - gi|23510226|ref|NP_702892.1| Plasmodium falciparum trophozoite antigen r45-like protein [Plasmodium ...
166.0 [0..6] [418..462]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLLMSKFLV WIIIFGNFFV VHFFLCFKIP NNKITNVLTY DNSKKQRINS KHNTFLYKND  60
   61 TLNKLLNRKK NKHTLFYRSK KEKDIQESGY LYPFDHLEKK KTKFPPDPYI PSEDEKESSI 120
  121 DIFHDKINDD DLMIYEDDDD AKKYFGKTTF NKPNIIQKDE NSEDDQDDDL NDQNDDPINN 180
  181 PTNNLTDNPT NNSTDNPTNN SIDNPTNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [209-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIDNPTNNSI DNPTNNSIDN PTNNSIDNPT NNSIDNPTNN STDNPINSPN YQQVTQSNII  60
   61 LEEENNTNKT DIEKDIININ FYSSEEKKIA CEMIKDQIYY LLHSSMDKTF IETFNINIES 120
  121 HIVPSEKRIC VSYNMKSHTF KRSISNLSDL IEFSNKLKYV LDERIHKLYY EDKNNENAYL 180
  181 NKTLRKELEI GKKERDVTNL SKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [412-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLQMSIESSL KLIEKCMQNM YKQNYEITLH DLKLAYNMLP CKYYGFFLSN LCSTISTLSY  60
   61 YVNDLQGTFN FALKSIKYEP KYNVAWKCLG DAYRSFRKFW QAKNFYDIAI YLGYKDEKGE 120
  121 RFEDIVQELN NLTENALKNV DLLKEHMNNS TNIIIKKNIG IVLNKNPDSI GGCYVSYIIE 180
  181 GSKASKKNLH H

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [603-699]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDQIVALNNH VTYGKPIDFC LKAFQKNDGT YDIIFFKGNI IELYGLKAYK YLMKNDLFYA  60
   61 LFENEQIVSF KRNETILFDM KGFGTFSEYG MSKAEFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle