| Protein: | GIF3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 223 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIF3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
143.0 | [0..1] | [223..1] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MQQSPQMIPM VLPSFPPTNN ITTEQIQKYL DENKKLIMAI LENQNLGKLA ECAQYQALLQ 60
61 KNLMYLAAIA DAQPQPPAAT LTSGAM
|
| Detection Method: |  |
| Confidence: | 11.823909 |
| Match: | PF05030.3 |
| Description: | No description for PF05030.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.528 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.404 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.309 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.268 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.254 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
|
Region A: Residues: [87-223] |
1 11 21 31 41 51
| | | | | |
1 TPQAMAPNPS SMQPPPSYFM QQHQAVGMAQ QIPPGIFPPR GPLQFGSPHQ FLDPQQQLHQ 60
61 QAMQGHMGIR PMGLNNNNGL QHQMHHHETA LAANNAGPND ASGGGKPDGT NMSQSGADGQ 120
121 GGSAARHGGG DAKTEGK
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
