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View Structure Prediction Details

Protein: gi|2130332, gi|1...
Organism: Schizosaccharomyces pombe
Length: 92 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2130332, gi|1....

Description E-value Query
Range
Subject
Range
SPAC22G7.11c - conserved fungal protein
YAAB_SCHPO - UPF0654 protein C22G7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22G7.11c PE=...
127.0 [0..1] [92..49]
gi|67903306, gi|... - gi|67903306|ref|XP_681909.1| hypothetical protein AN8640.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
68.0 [0..35] [89..33]
gi|42547252, gi|... - gi|46137473|ref|XP_390428.1| hypothetical protein FG10252.1 [Gibberella zeae PH-1], gi|42547252|gb|E...
66.0 [0..35] [87..31]
gi|39968307, gi|... - gi|39968307|ref|XP_365544.1| hypothetical protein MGG_02246 [Magnaporthe grisea 70-15], gb|EAA54261....
64.0 [0..35] [87..31]
gi|1022346, gi|2... - gi|2130428|pir||S62478 hypothetical protein SPAC4G8.01c - fission yeast (Schizosaccharomyces pombe)...
58.0 [0..1] [37..49]
gi|85104300 - gi|85104300|ref|XP_961721.1| hypothetical protein
gi|32412244, gi|... - gi|32412244|ref|XP_326602.1| hypothetical protein ( hypothetical protein 13E11.400 [imported] - Neur...
57.0 [0..50] [84..29]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGRDLDYEDL GDYDEDADFD NEEGLNVLGD ESGFVDDPMK TGDLVEEDQL EGKNIENVRG  60
   61 GYKATMHNPN VSKQAKTRAQ RALEEIDDET QA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.613 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.613 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.604 a.77.1 DEATH domain
View Download 0.592 a.24.28 Description not found.
View Download 0.380 a.156.1 S13-like H2TH domain
View Download 0.285 a.4.5 "Winged helix" DNA-binding domain
View Download 0.274 a.29.14 Description not found.
View Download 0.241 a.118.18 Cysteine rich protein B (HcpB)
View Download 0.217 a.3.1 Cytochrome c


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle