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View Structure Prediction Details

Protein: gi|7491755, gi|2...
Organism: Schizosaccharomyces pombe
Length: 544 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7491755, gi|2....

Description E-value Query
Range
Subject
Range
SFC9_SCHPO - Putative transcription factor tau subunit sfc9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...
sfc9 - transcription factor TFIIIC complex subunit Sfc9
1063.0 [0..1] [544..130]
gi|66848926, gi|... - gi|70992889|ref|XP_751293.1| conserved hypothetical protein [Aspergillus fumigatus Af293], gi|668489...
50.0 [0..462] [541..612]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTHLPSDPL ELCRIHSVAW SPLVSLPSSS PWGVCLFALG AESGHVHLSI MSHSSTPFFK  60
   61 SFDLNCSWVV QLSFSSWNVV GDSATCLLSC SSRNGEIRIL KIAISSHSDT FDTAMQELPF 120
  121 SLDY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPFSPLLAWS SPLANVEYLA LVYPGHLFAF RYDKSLGKFC SFLNHNLLSL CSPSGVLFGH  60
   61 NDIDTIYVYI LTHSGTLETF SLLDNSISML DSPERHVLEK FLNNHLQNYG SVSDDSIKTL 120
  121 KIHGFC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [251-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSPYLSSAAL HFSISYPASF TYVVTAAERS YFNFIPSLFS KSVFSHMITS SLNNLCVAPS  60
   61 AGCLLEISLM NDTLKEKTDI FTMLTNSLSS FLVTDYDFFL ELKHLIDISS LSNLYLDSSL 120
  121 NAMRLLYGWS VYKQKALDAT LLNSLRYRLT LYIMLYTLSQ ISLDPSYLTS DCKAVLRNFV 180
  181 SFTYKELAEV PIAMEVANEI AKSLEVSSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [460-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSETCPACEA TVQFNNTSLA TCDNGHVWRR CSVTMLLLSQ KAAKYCAVCN SIVAIFNPSQ  60
   61 TKCLLADLQN ELSICFYCGG HFLVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle