YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|17427769
Organism:	Ralstonia solanacearum
Length:	294 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17427769.

Description	E-value	Query Range	Subject Range
gi\|83748991, gi\|... - gi\|83748991\|ref\|ZP_00945999.1\| Tryptophan 2,3-dioxygenase [Ralstonia solanacearum UW551], gi\|8372432...	483.0	[0..1]	[294..1]
T23O_CUPNH - Tryptophan 2,3-dioxygenase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) ...	456.0	[0..8]	[294..6]
gi\|91785047, gi\|... - gi\|91785047\|ref\|YP_560253.1\| tryptophan 2,3-dioxygenase [Burkholderia xenovorans LB400], gi\|91689001...	454.0	[0..1]	[294..5]
gi\|67529483, gi\|... - gi\|67549184\|ref\|ZP_00427055.1\| Tryptophan 2,3-dioxygenase [Burkholderia vietnamiensis G4], gi\|675294...	450.0	[0..4]	[294..13]
gi\|73540510, gi\|... - gi\|73540510\|ref\|YP_295030.1\| tryptophan 2,3-dioxygenase [Ralstonia eutropha JMP134], gi\|72117923\|gb\|...	447.0	[0..14]	[294..6]
gi\|84355569, gi\|... - gi\|84355569\|ref\|ZP_00980449.1\| COG3483: Tryptophan 2,3-dioxygenase (vermilion) [Burkholderia cenocep...	443.0	[0..1]	[294..1]
gi\|115282666, gi... - gi\|115352678\|ref\|YP_774517.1\| tryptophan 2,3-dioxygenase [Burkholderia ambifaria AMMD], gi\|115282666...	442.0	[0..1]	[294..6]
T23O_BURL3 - Tryptophan 2,3-dioxygenase OS=Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194... T23O_BURS3 - Tryptophan 2,3-dioxygenase OS=Burkholderia sp. (strain 383) GN=kynA PE=3 SV=1	441.0	[0..7]	[294..4]
T23O_CUPMC - Tryptophan 2,3-dioxygenase OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 ...	441.0	[0..14]	[294..6]
gi\|254251567, gi... - gi\|84362773\|ref\|ZP_00987387.1\| COG3483: Tryptophan 2,3-dioxygenase (vermilion) [Burkholderia dolosa ...	441.0	[0..16]	[294..33]

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Predicted Domain #1

Region A:
Residues: [1-294]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPIQPTRP AASGCPMHGA QAESWHDAQM DFSKSMSYGD YLALDQILNA QHPRSPDHNE  60
   61 MLFIVQHQTT ELWMKLMLHE LRAARDCVRN DDLPPAFKML ARVSRIMDQL VQAWNVLATM 120
  121 TPPEYSAMRP HLGQSSGFQS YQYREIEFIL GNKNAAMLQP HAHQPEHYAQ VKAALETPSL 180
  181 YDEAIRYMAR HGFAFDADCI ERDWSRPVTY NASVEAAWLE VYRDPTHHWE LYELAEKFVD 240
  241 LEDAFRQWRF RHVTTVERVI GFKRGTGGTE GVNYLRKMLD VVLFPELWKL RTDL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	125.0
Match:	2noxA
Description:	No description for 2noxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits