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View Structure Prediction Details

Protein: ENSPTRT00000003256
Organism: Pan troglodytes
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSPTRT00000003256.

Description E-value Query
Range
Subject
Range
UCHL5_PIG - Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa GN=UCHL5 PE=2 SV=1
ENSOCUP00000014412 - pep:novel chromosome:oryCun2:16:77766040:77802483:1 gene:ENSOCUG00000016766 transcript:ENSOCUT000000...
487.0 [0..1] [329..1]
gi|74006052 - gi|74006052|ref|XP_536116.2| PREDICTED: similar to ubiquitin C-terminal hydrolase UCH37 [Canis famil...
487.0 [0..1] [329..1]
UCHL5_MOUSE - Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus GN=Uchl5 PE=1 SV=2
486.0 [0..1] [329..1]
gi|55859538 - gi|55859538|emb|CAI10828.1| ubiquitin carboxyl-terminal hydrolase L5 [Homo sapiens]
ENSPTRT00000058401 - null
485.0 [0..1] [329..13]
gi|61369961, gi|... - gi|61369961|gb|AAX43419.1| ubiquitin carboxyl-terminal hydrolase L5 [synthetic construct], gi|305846...
484.0 [0..1] [329..1]
gi|75773502, gi|... - gi|76253713|ref|NP_776906.2| ubiquitin carboxyl-terminal hydrolase L5 [Bos taurus], gi|75773502|gb|A...
483.0 [0..1] [329..1]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGNAGEWCL MESDPGVFTE LIKGFGCRGA QVEEIWSLEP ENFEKLKPVH GLIFLFKWQP  60
   61 GEEPAGSVVQ DSRLDTIFFA KQVINNACAT QAIVSVLLNC THQDVHLGET LSEFKEFSQS 120
  121 FDAAMKGLAL SNSDVIRQVH NSFARQQMFE FDTKTSAKEE DAFHFVSYVP VNGRLYELDG 180
  181 LREGPIDLGA CNQDDWISAV RPVIEKRIQK YSEGEIRFNL MAIVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.0
Match: 1uchA
Description: DEUBIQUITINATING ENZYME UCH-L3 (HUMAN) AT 1.8 ANGSTROM RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [226-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRKMIYEQKI AELQRQLAEE EPMDTDQGNS MLSAIQSEVA KNQMLIEEEV QKLKRYKIEN  60
   61 IRRKHNYLPF IMELLKTLAE HQQLIPLVEK AKEKQNAKKA QETK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle