YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ENSPTRT00000030708
Organism: Pan troglodytes
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSPTRT00000030708.

Description E-value Query
Range
Subject
Range
gi|57096847 - gi|57096847|ref|XP_532691.1| PREDICTED: similar to Arfaptin-1 (ADP-ribosylation factor interacting p...
569.0 [0..1] [373..1]
gi|82889765, gi|... - gi|94370014|ref|XP_983596.1| PREDICTED: similar to arfaptin 1 isoform 8 [Mus musculus], gi|82889765|...
561.0 [0..1] [373..1]
ARFP1_RAT - Arfaptin-1 OS=Rattus norvegicus GN=Arfip1 PE=1 SV=1
551.0 [0..1] [373..1]
gi|1279761, gi|7... - gi|85397953|gb|AAI05117.1| ADP-ribosylation factor interacting protein 1 [Homo sapiens], gi|85397951...
ENSPTRT00000046720 - null
522.0 [0..1] [373..1]
gi|109075948 - gi|109075948|ref|XP_001086103.1| PREDICTED: similar to ADP-ribosylation factor interacting protein 1...
517.0 [0..1] [373..142]

Back

Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQESPKNSA AEIPVTSNGE VDDSREHSFN RDLKHSLPSG LGLSETQITS HGFDNTKEGV  60
   61 IEAGAFQGSP APPLPSVMSP SRVAASRLAQ QGSDLIVPAG GQRTQTKSGP VILADEIKNP 120
  121 AMEKLELVRK WSLNTYKCTR QII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [144-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEKLGRGSRT VDLELEAQID ILRDNKKKYE NILKLAQTLS TQLFQMVHTQ RQLGDAFADL  60
   61 SLKSLELHEE FGYNADTQKL LAKNGETLLG AINFFIASVN TLVNKTIEDT LMTVKQYESA 120
  121 RIEYDAYRTD LEELNLGPRD ANTLPKIEQS QHLFQAHKEK YDKMRNDVSV KLKFLEENKV 180
  181 KVLHNQLVLF HNAIAAYFAG NQKQLEQTLK QFHIKLKTPG VDAPSWLEEQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.69897
Match: 1i49A
Description: Arfaptin, Rac-binding fragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle