Protein: | gi|17547484 |
Organism: | Ralstonia solanacearum GMI1000 |
Length: | 198 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17547484.
Description | E-value | Query Range |
Subject Range |
|
273.0 | [0..1] | [198..1] |
|
272.0 | [0..1] | [198..1] |
|
264.0 | [0..8] | [198..1] |
|
257.0 | [0..8] | [198..1] |
|
257.0 | [0..8] | [198..1] |
|
255.0 | [0..8] | [198..1] |
|
253.0 | [0..2] | [198..1] |
|
250.0 | [0..8] | [198..1] |
|
249.0 | [0..8] | [198..1] |
|
246.0 | [0..1] | [198..1] |
Region A: Residues: [1-84] |
1 11 21 31 41 51 | | | | | | 1 MTTNMFGLDD SLTARDERVA RETWHKAQNL YDGVLGMQSL GPRVGGAAKL MPQDANLKDD 60 61 GGREDAMNLF KTVRPNIVQS IRAF |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.581 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.569 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.569 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.515 | a.29.14 | Description not found. |
View | Download | 0.488 | b.36.1 | PDZ domain-like |
View | Download | 0.483 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
View | Download | 0.462 | a.156.1 | S13-like H2TH domain |
View | Download | 0.457 | a.158.1 | F-box domain |
View | Download | 0.457 | a.158.1 | F-box domain |
View | Download | 0.453 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
Region A: Residues: [85-198] |
1 11 21 31 41 51 | | | | | | 1 RVADLAEAAT GLGQHFLYAN CAAATTKGEV LDVIAREFLF PKHFGKNFDA LADCLTDMIF 60 61 KAGPQPGFVI VLEGLPCAPK FDKEARETLL DVFRDAAEFW GERKVQFRVF YSFA |
Detection Method: | ![]() |
Confidence: | 23.39794 |
Match: | 1a19A |
Description: | Barstar (barnase inhibitor) |
Matching Structure (courtesy of the PDB):![]() |