YRC Public Data Repository - Protein Structure Prediction

Protein:	CRCB1_BRADU
Organism:	Bradyrhizobium japonicum USDA 110
Length:	142 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRCB1_BRADU.

Description	E-value	Query Range	Subject Range
gi\|86750065, gi\|... - gi\|86750065\|ref\|YP_486561.1\| hypothetical protein RPB_2948 [Rhodopseudomonas palustris HaA2], gi\|865...	120.0	[0..7]	[140..11]
gi\|115524857, gi... - gi\|115524857\|ref\|YP_781768.1\| camphor resistance CrcB protein [Rhodopseudomonas palustris BisA53], g...	113.0	[0..5]	[142..4]
gi\|83368512, gi\|... - gi\|83368512\|ref\|ZP_00913375.1\| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17025], ...	113.0	[0..10]	[142..2]
gi\|218900224, gi... - gi\|218900224\|ref\|YP_002448635.1\| crcB protein [Bacillus cereus G9842], gi\|218540671\|gb\|ACK93065.1\| c... gi\|75760557, gi\|... - gi\|75760557\|ref\|ZP_00740591.1\| CrcB family protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228791497, gi... - gi\|228968194\|ref\|ZP_04129194.1\| Protein crcB 1 [Bacillus thuringiensis serovar sotto str. T04001], g... gi\|228903577, gi... - gi\|228903577\|ref\|ZP_04067698.1\| Protein crcB 1 [Bacillus thuringiensis IBL 4222], gi\|228856006\|gb\|EE...	111.0	[0..14]	[139..11]
CRCB1_RHOPB - Putative fluoride ion transporter CrcB 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=crcB1 PE=3...	110.0	[0..8]	[142..5]
gi\|67545817, gi\|... - gi\|67545817\|ref\|ZP_00423736.1\| Camphor resistance CrcB protein [Burkholderia vietnamiensis G4], gi\|6...	109.0	[0..13]	[136..99]
CRCB_OCEIH - Protein crcB homolog OS=Oceanobacillus iheyensis GN=crcB PE=3 SV=1 CRCB_OCEIH - Putative fluoride ion transporter CrcB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / K...	109.0	[0..13]	[133..1]
gi\|47555936, gi\|... - gi\|47567315\|ref\|ZP_00238028.1\| crcB protein [Bacillus cereus G9241], gi\|47555936\|gb\|EAL14274.1\| crcB...	108.0	[0..14]	[139..4]
gi\|166852950, gi... - gi\|167038710\|ref\|YP_001661695.1\| CrcB protein [Thermoanaerobacter sp. X514], gi\|166852950\|gb\|ABY9135... gi\|241883051, gi... - gi\|241904583\|ref\|ZP_04789268.1\| CrcB protein [Thermoanaerobacter brockii subsp. finnii Ako-1], gi\|24... gi\|242258471, gi... - gi\|242258471\|ref\|ZP_04803270.1\| CrcB protein [Thermoanaerobacter sp. X513], gi\|242230005\|gb\|EES32417... gi\|167038577, gi... - gi\|76795537\|ref\|ZP_00777910.1\| Camphor resistance CrcB protein [Thermoanaerobacter ethanolicus ATCC ...	108.0	[0..14]	[141..1]

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Predicted Domain #1

Region A:
Residues: [1-142]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVPSSAERW RSAMLYAWVS AGSVVGGLTR YLVGLALDTG PGFPFATLFI NATGSLIIGF  60
   61 YATLTGPDGR MLARPEHRQF VMTGFCGGYT TFSAFSLETF RLFHGGMKYI ALAYVASSVV 120
  121 CWLVSVWLGH IMASRYNRLK RS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	25.886057
Match:	PF02537.6
Description:	No description for PF02537.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.995	0.001	integral to membrane	a.29.3	Acyl-CoA dehydrogenase C-terminal domain-like

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.983781513080862	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: