Protein: | RNH2A_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 307 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNH2A_YEAST.
Description | E-value | Query Range |
Subject Range |
|
4.0E-91 | [1..307] | [1..307] |
|
1.0E-79 | [5..302] | [398..691] |
|
3.0E-74 | [23..304] | [2..276] |
|
1.0E-67 | [18..274] | [16..262] |
|
6.0E-67 | [2..283] | [35..311] |
|
4.0E-65 | [2..267] | [12..275] |
|
2.0E-63 | [8..276] | [48..307] |
|
9.0E-56 | [29..275] | [13..239] |
Region A: Residues: [1-205] |
1 11 21 31 41 51 | | | | | | 1 MVPPTVEASL ESPYTKSYFS PVPSALLEQN DSPIIMGIDE AGRGPVLGPM VYAVAYSTQK 60 61 YQDETIIPNY EFDDSKKLTD PIRRMLFSKI YQDNEELTQI GYATTCITPL DISRGMSKFP 120 121 PTRNYNLNEQ AHDVTMALID GVIKQNVKLS HVYVDTVGPP ASYQKKLEQR FPGVKFTVAK 180 181 KADSLYCMVS VASVVAKVTR DILVE |
Detection Method: | |
Confidence: | 234.70927 |
Match: | 1io2A_ |
Description: | Class II ribonuclease H (RNase HII) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
ribonuclease H activity | 8.30690368719529 | bayes_pls_golite062009 |
ribonuclease activity | 4.81599779544001 | bayes_pls_golite062009 |
exoribonuclease activity | 3.01417328311605 | bayes_pls_golite062009 |
exoribonuclease activity, producing 5'-phosphomonoesters | 2.89077854960958 | bayes_pls_golite062009 |
exonuclease activity | 2.86892175148145 | bayes_pls_golite062009 |
nuclease activity | 2.84202779131927 | bayes_pls_golite062009 |
hydrolase activity | 2.78602644579272 | bayes_pls_golite062009 |
DNA polymerase activity | 2.75375255857158 | bayes_pls_golite062009 |
DNA-directed DNA polymerase activity | 2.66279543366449 | bayes_pls_golite062009 |
endonuclease activity | 2.63074055051349 | bayes_pls_golite062009 |
endoribonuclease activity | 2.59247838057313 | bayes_pls_golite062009 |
hydrolase activity, acting on ester bonds | 2.57498413015114 | bayes_pls_golite062009 |
3'-5'-exoribonuclease activity | 2.49957333962564 | bayes_pls_golite062009 |
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.94077739152313 | bayes_pls_golite062009 |
deoxyribonuclease activity | 1.87431870698721 | bayes_pls_golite062009 |
catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
nucleotidyltransferase activity | 1.12401205867904 | bayes_pls_golite062009 |
nucleic acid binding | 1.12235348738959 | bayes_pls_golite062009 |
transcription regulator activity | 1.10433412699603 | bayes_pls_golite062009 |
3'-5' exonuclease activity | 0.86862629020506 | bayes_pls_golite062009 |
exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.782108781904855 | bayes_pls_golite062009 |
exodeoxyribonuclease activity | 0.77421125364834 | bayes_pls_golite062009 |
binding | 0.762139256580538 | bayes_pls_golite062009 |
DNA binding | 0.710663468386339 | bayes_pls_golite062009 |
endoribonuclease activity, producing 5'-phosphomonoesters | 0.708753843279937 | bayes_pls_golite062009 |
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.598360955770972 | bayes_pls_golite062009 |
endodeoxyribonuclease activity | 0.48776342704945 | bayes_pls_golite062009 |
transcription factor activity | 0.332903382446869 | bayes_pls_golite062009 |
Region A: Residues: [206-307] |
1 11 21 31 41 51 | | | | | | 1 SLKRDPDEIL GSGYPSDPKT VAWLKRNQTS LMGWPANMVR FSWQTCQTLL DDASKNSIPI 60 61 KWEEQYMDSR KNAAQKTKQL QLQMVAKPVR RKRLRTLDNW YR |
Detection Method: | |
Confidence: | 234.70927 |
Match: | 1io2A_ |
Description: | Class II ribonuclease H (RNase HII) |
Matching Structure (courtesy of the PDB): |