YRC Public Data Repository - Protein Structure Prediction

Protein:	YFF1_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	160 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFF1_YEAST.

Description	E-value	Query Range	Subject Range
YFL051C - Putative protein of unknown function; YFL051C is not an essential gene YFF1_YEAST - Uncharacterized membrane protein YFL051C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...	1.0E-68	[1..160]	[1..160]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	4.0E-58	[1..152]	[1..145]
gi\|8574441, gi\|8... - gi\|8574443\|dbj\|BAA96796.1\| flocculin [Saccharomyces pastorianus], gi\|8574441\|dbj\|BAA96795.1\| floccul...	4.0E-45	[1..152]	[1..118]

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Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIPHSVFSA LLVFVALATT TLASTEACLP TNKREDGMNI NFYEYTIGDQ TTYLEPEYMG  60
   61 YEYSNTKKLG SVSGQTNLSI YYSPPCESTP TCVTYAVLKR DEDGYDPCGP LYETKKRDTE 120
  121 YCDPNTAYWS SDLFGFYTTP TNVTVEMTGY LIWSMGNRRR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits