| Protein: | tr|C8ZLJ3|C8ZLJ3_PIG |
| Organism: | Sus scrofa |
| Length: | 161 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tr|C8ZLJ3|C8ZLJ3_PIG.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-33 | [16..157] | [46..182] |
|
|
2.0E-32 | [12..157] | [44..183] |
|
|
7.0E-32 | [13..160] | [43..187] |
|
|
1.0E-31 | [16..157] | [73..209] |
|
|
2.0E-31 | [22..157] | [54..183] |
|
|
2.0E-31 | [16..157] | [74..210] |
|
|
4.0E-31 | [16..157] | [73..209] |
|
|
4.0E-31 | [17..157] | [74..209] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MKAVSPVRPS GRKAPSGCGG GELALRCLAE HGHSLGGSAA AAAAAAAARC KAAEAAADEP 60
61 ALCLQCDMND CYSRLRRLVP TIPPNKKVSK VEILQHVIDY ILDLQLALET HPALLRQPPP 120
121 PAPPHHPAGT CPAAPPRTPL TALNTDPAGA VNKQGDSILC R
|
| Detection Method: |  |
| Confidence: | 11.39794 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| transcription repressor activity | 2.58751248599889 | bayes_pls_golite062009 |
| transcription activator activity | 2.5495467409976 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.31910036997977 | bayes_pls_golite062009 |
| transcription corepressor activity | 2.03674713048499 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| promoter binding | 0.8576109846276 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
