YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25526514
Organism:	Brucella melitensis
Length:	124 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25526514.

Description	E-value	Query Range	Subject Range
gi\|83269099 - gi\|83269099\|ref\|YP_418390.1\| flagellar basal body-associated protein FliL [Brucella melitensis biova... gi\|62197300, gi\|... - gi\|62317107\|ref\|YP_222960.1\| flagellar protein FliL [Brucella abortus bv. 1 str. 9-941], gi\|62197300... gi\|82939373 - gi\|82939373\|emb\|CAJ12323.1\| Flagellar basal body-associated protein FliL [Brucella melitensis biovar... gi\|225686017, gi... - gi\|225686017\|ref\|YP_002733989.1\| flagellar basal body-associated protein FliL [Brucella melitensis A... gi\|161337052, gi... - gi\|161620241\|ref\|YP_001594127.1\| flagellar basal body-associated protein FliL [Brucella canis ATCC 2... gi\|254691407 - gi\|254691407\|ref\|ZP_05154661.1\| flagellar basal body-associated protein FliL [Brucella abortus bv. 6... gi\|189020946, gi... - gi\|189022372\|ref\|YP_001932113.1\| Flagellar basal body-associated protein FliL [Brucella abortus S19]... gi\|254702581 - gi\|254702581\|ref\|ZP_05164409.1\| flagellar basal body-associated protein FliL [Brucella suis bv. 3 st... gi\|254706287 - gi\|254706287\|ref\|ZP_05168115.1\| flagellar basal body-associated protein FliL [Brucella pinnipedialis... gi\|254695295 - gi\|254695295\|ref\|ZP_05157123.1\| flagellar basal body-associated protein FliL [Brucella abortus bv. 3... gi\|254698390 - gi\|254698390\|ref\|ZP_05160218.1\| flagellar basal body-associated protein FliL [Brucella abortus bv. 2... gi\|23463498, gi\|... - gi\|23499921\|ref\|NP_699361.1\| flagellar protein FliL, putative [Brucella suis 1330], gi\|23463498\|gb\|A... gi\|254711419 - gi\|254711419\|ref\|ZP_05173230.1\| flagellar basal body-associated protein FliL [Brucella pinnipedialis... gi\|254731837 - gi\|254731837\|ref\|ZP_05190415.1\| flagellar basal body-associated protein FliL [Brucella abortus bv. 4... gi\|148369170, gi... - gi\|148557885\|ref\|YP_001257217.1\| putative flagellar protein FliL [Brucella ovis ATCC 25840], gi\|1483...	192.0	[0..1]	[124..40]
gi\|15073597 - gi\|15073597\|emb\|CAC45239.1\| Flagellar transmembrane protein [Sinorhizobium meliloti 1021] gi\|15964420 - gi\|15964420\|ref\|NP_384773.1\| flagellar transmembrane protein [Sinorhizobium meliloti 1021]	184.0	[0..10]	[124..55]
gi\|15155485, gi\|... - gi\|17934458\|ref\|NP_531248.1\| flagellar protein [Agrobacterium tumefaciens str. C58], gi\|17738898\|gb\|... gi\|25522969, gi\|... - pir\|\|AF2643 flagellar protein [imported] - Agrobacterium tumefaciens (strain C58, Dupont), pir\|\|F9...	174.0	[0..22]	[124..67]
gi\|150395490, gi... - gi\|150395490\|ref\|YP_001325957.1\| flagellar basal body-associated protein FliL [Sinorhizobium medicae...	169.0	[0..10]	[124..55]
gi\|110632651, gi... - gi\|69279021\|ref\|ZP_00614029.1\| Flagellar basal body-associated protein FliL [Mesorhizobium sp. BNC1]...	168.0	[0..3]	[124..35]
gi\|13472581, gi\|... - gi\|14023327\|dbj\|BAB49934.1\| mlr2923 [Mesorhizobium loti MAFF303099], gi\|13472581\|ref\|NP_104148.1\| hy...	166.0	[0..11]	[124..52]
gi\|2275166 - gi\|2275166\|gb\|AAB81418.1\| FliL [Sinorhizobium meliloti]	165.0	[0..10]	[124..55]
gi\|86280419, gi\|... - gi\|86356317\|ref\|YP_468209.1\| flagellar biosynthesis transmembrane protein [Rhizobium etli CFN 42], g...	163.0	[0..26]	[124..72]
gi\|115255135, gi... - gi\|116250487\|ref\|YP_766325.1\| orfc; method: conceptual translation supplied by author (flil) [Rhizob...	162.0	[0..26]	[124..72]
gi\|27381979, gi\|... - gi\|27381979\|ref\|NP_773508.1\| flagellar protein [Bradyrhizobium japonicum USDA 110], gi\|27355149\|dbj\|...	154.0	[0..8]	[124..29]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISAGQQASA KPSGKEDKPK PGSFESRSIG AVVPLQPIIT NLGIPQTTWV RLEASLVAKP  60
   61 GHEIPPAMAA NVSDDFMRFL RSVNLMQLQG AAGLAYLRTD LEERARLRSE GAVDRVFISA 120
  121 LVVE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits