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View Structure Prediction Details

Protein: ENSCJAT00000027617
Organism: Callithrix jacchus
Length: 83 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSCJAT00000027617.

Description E-value Query
Range
Subject
Range
gi|50758757 - gi|50758757|ref|XP_417405.1| PREDICTED: similar to ribosomal protein S21; 40S ribosomal protein S21 ...
2.0E-40 [1..83] [79..161]
gi|109091379 - gi|109091379|ref|XP_001088137.1| PREDICTED: similar to ribosomal protein S21 [Macaca mulatta]
3.0E-37 [1..83] [1..83]
RS21_RAT - 40S ribosomal protein S21 OS=Rattus norvegicus GN=Rps21 PE=1 SV=1
7.0E-37 [1..83] [1..83]
RS21_MOUSE - 40S ribosomal protein S21 OS=Mus musculus GN=Rps21 PE=1 SV=1
7.0E-37 [1..83] [1..83]
gi|61369987 - gi|61369987|gb|AAX43423.1| ribosomal protein S21 [synthetic construct]
9.0E-37 [1..81] [1..81]
RS21_XENLA - 40S ribosomal protein S21 OS=Xenopus laevis GN=rps21 PE=3 SV=1
1.0E-36 [1..83] [1..83]
gi|17390310 - gi|17390310|gb|AAH18140.1| RPS21 protein [Homo sapiens]
gi|61360074, gi|... - gi|61360074|gb|AAX41807.1| ribosomal protein S21 [synthetic construct], gi|123996707|gb|ABM85955.1| ...
2.0E-36 [1..81] [1..81]
RS21_KLULA - 40S ribosomal protein S21 OS=Kluyveromyces lactis GN=RPS21 PE=3 SV=1
RS21_KLULA - 40S ribosomal protein S21 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12...
2.0E-36 [1..83] [1..83]
gi|91093173 - gi|91093173|ref|XP_967937.1| PREDICTED: similar to ribosomal protein S21e [Tribolium castaneum]
2.0E-36 [1..83] [1..83]
gi|73992252 - gi|73992252|ref|XP_852526.1| PREDICTED: similar to ribosomal protein S21 [Canis familiaris]
2.0E-36 [1..83] [33..115]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNDAGEFVD LYVPRKCSAS NRIIGAKDHA SIQMNVAEVD KVTGRFNGQF KTYAICGAIR  60
   61 RMGESDDSIL RLAKADGIVS KNF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 63.79588
Match: PF01249.9
Description: No description for PF01249.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle