YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20806666, gi\|...
Organism:	Thermoanaerobacter tengcongensis MB4
Length:	283 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20806666, gi|....

Description	E-value	Query Range	Subject Range
gi\|89211620, gi\|... - gi\|89211620\|ref\|ZP_01189975.1\| Ketose-bisphosphate aldolase, class-II:Fructose-1,6-bisphosphate aldo...	401.0	[0..2]	[283..3]
gi\|76795972, gi\|... - gi\|76795972\|ref\|ZP_00778342.1\| Ketose-bisphosphate aldolase, class-II:Fructose-1,6-bisphosphate aldo... gi\|242231659, gi... - gi\|242256845\|ref\|ZP_04801728.1\| fructose-1,6-bisphosphate aldolase, class II [Thermoanaerobacter sp.... gi\|241884706, gi... - gi\|241902905\|ref\|ZP_04787635.1\| fructose-1,6-bisphosphate aldolase, class II [Thermoanaerobacter bro... gi\|166853001, gi... - gi\|167038761\|ref\|YP_001661746.1\| putative aldolase [Thermoanaerobacter sp. X514], gi\|166853001\|gb\|AB...	398.0	[0..1]	[283..1]
gi\|77995172, gi\|... - gi\|78043057\|ref\|YP_359000.1\| putative aldolase [Carboxydothermus hydrogenoformans Z-2901], gi\|779951...	396.0	[0..2]	[283..3]
gi\|49235160, gi\|... - gi\|83591220\|ref\|YP_431229.1\| fructose-1,6-bisphosphate aldolase [Moorella thermoacetica ATCC 39073],...	394.0	[0..2]	[282..3]
ALF_GEOSE - Fructose-bisphosphate aldolase OS=Geobacillus stearothermophilus GN=fba PE=3 SV=3	391.0	[0..2]	[283..3]
gi\|56381763, gi\|... - gi\|56421921\|ref\|YP_149239.1\| fructose-bisphosphate aldolase [Geobacillus kaustophilus HTA426], gi\|56... gi\|229497815, gi... - gi\|229497815\|ref\|ZP_04391514.1\| fructose-1,6-bisphosphate aldolase, class II [Geobacillus sp. Y412MC... gi\|221087046, gi... - gi\|221087046\|ref\|ZP_03556586.1\| fructose-1,6-bisphosphate aldolase, class II [Geobacillus sp. Y412MC...	390.0	[0..2]	[283..3]
gi\|25291087 - pir\|\|B84123 fructose-1,6-bisphosphate aldolase fbaA [imported] - Bacillus halodurans (strain C-125) gi\|15616348, gi\|... - gi\|15616348\|ref\|NP_244653.1\| fructose-1,6-bisphosphate aldolase [Bacillus halodurans C-125], gi\|1017...	389.0	[0..2]	[283..3]
gi\|46915257, gi\|... - gi\|54301837\|ref\|YP_131830.1\| tagatose 1,6-diphosphate aldolase [Photobacterium profundum SS9], gi\|46...	388.0	[0..2]	[282..7]
gi\|170023231, gi... - gi\|170023231\|ref\|YP_001719736.1\| tagatose-bisphosphate aldolase [Yersinia pseudotuberculosis YPIII],... gi\|186896510, gi... - gi\|186896510\|ref\|YP_001873622.1\| tagatose-bisphosphate aldolase [Yersinia pseudotuberculosis PB1/+],... gi\|51597402, gi\|... - gi\|51597402\|ref\|YP_071593.1\| tagatose-bisphosphate aldolase [Yersinia pseudotuberculosis IP 32953], ... Q667A5\|Q667A5_YERPS - Putative aldolase - Yersinia pseudotuberculosis gi\|153950803, gi... - gi\|153950803\|ref\|YP_001399913.1\| tagatose-bisphosphate aldolase [Yersinia pseudotuberculosis IP 3175...	387.0	[0..2]	[282..3]
gi\|219541095, gi... - gi\|219670835\|ref\|YP_002461270.1\| fructose-1,6-bisphosphate aldolase, class II [Desulfitobacterium ha...	387.0	[0..2]	[283..3]

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Predicted Domain #1

Region A:
Residues: [1-283]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVTGIEILE KAHKEGYAVG AFNTSNLEIT QAIVEAAEET RSPVIIQVSE GGLKYAGIEA  60
   61 ISAIVRTLAE KATVPIALHL DHGTDFNTIM KCLRNGWTSV MIDASKFPLE ENIQRTRKIV 120
  121 EIAHSMGVSV EAEIGKIGGT EDHITVDERE ASMTDPEEAL RFAKETGVDY LAIAIGTAHG 180
  181 PYKGEPKLDF ERLKRIKELL NMPLVLHGAS GVPEEAIKKA VSLGINKINI DTDVRQAFTA 240
  241 RLRRLLEEDK EVYDPRKILG PCKEAMKEVI KQKMILFGSS LKA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	103.0
Match:	1rv8A
Description:	Class II fructose-1,6-bisphosphate aldolase from Thermus aquaticus in complex with cobalt
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.67031204377352	bayes_pls_golite062009
fructose-bisphosphate aldolase activity	1.88386308805564	bayes_pls_golite062009
transaldolase activity	1.66628808988861	bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups	1.38491877751839	bayes_pls_golite062009
aldehyde-lyase activity	0.351872954170322	bayes_pls_golite062009
binding	0.300492369985193	bayes_pls_golite062009
signal transducer activity	0.206436778535918	bayes_pls_golite062009
molecular transducer activity	0.206436778535918	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: