YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20807481
Organism:	Caldanaerobacter subterraneus subsp. tengcongensis
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20807481.

Description	E-value	Query Range	Subject Range
gi\|89088062, gi\|... - gi\|89097239\|ref\|ZP_01170129.1\| ArsC [Bacillus sp. NRRL B-14911], gi\|89088062\|gb\|EAR67173.1\| ArsC [Ba...	177.0	[0..1]	[136..1]
gi\|56421757, gi\|... - gi\|56421757\|ref\|YP_149075.1\| arsenate reductase [Geobacillus kaustophilus HTA426], gi\|56381599\|dbj\|B...	175.0	[0..1]	[136..1]
ARSC_BACLD - Protein ArsC OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9...	174.0	[0..1]	[136..1]
ARSC_BACSU - Protein ArsC OS=Bacillus subtilis (strain 168) GN=arsC PE=1 SV=1 gi\|221324029 - gi\|221324029\|ref\|ZP_03605323.1\| arsenate reductase [Bacillus subtilis subsp. subtilis str. SMY] gi\|221319751 - gi\|221319751\|ref\|ZP_03601045.1\| arsenate reductase [Bacillus subtilis subsp. subtilis str. JH642] gi\|221314829 - gi\|221314829\|ref\|ZP_03596634.1\| arsenate reductase [Bacillus subtilis subsp. subtilis str. NCIB 3610... ARSC_BACSU - Protein ArsC OS=Bacillus subtilis GN=arsC PE=1 SV=1	172.0	[0..1]	[136..1]
ARSC_BACHD - Protein ArsC OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)... ARSC_BACHD - Protein ArsC OS=Bacillus halodurans GN=arsC PE=3 SV=1	172.0	[0..1]	[136..1]
ARSC_BACMD - Protein ArsC OS=Bacillus megaterium (strain DSM 319) GN=arsC PE=3 SV=1 ARSC_BACME - Protein arsC OS=Bacillus megaterium GN=arsC PE=3 SV=1	168.0	[0..1]	[136..1]
ARSC_OCEIH - Protein arsC OS=Oceanobacillus iheyensis GN=arsC PE=3 SV=1 ARSC_OCEIH - Protein ArsC OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=arsC...	166.0	[0..1]	[136..1]
ARSC_BACSK - Protein ArsC OS=Bacillus clausii (strain KSM-K16) GN=arsC PE=3 SV=1	164.0	[0..1]	[136..1]
gi\|242257366, gi... - gi\|242257366\|ref\|ZP_04802234.1\| arsenate reductase (thioredoxin) [Thermoanaerobacter sp. X513], gi\|2... gi\|166854294, gi... - gi\|167040054\|ref\|YP_001663039.1\| protein tyrosine phosphatase [Thermoanaerobacter sp. X514], gi\|1668...	164.0	[0..1]	[140..1]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKILYFIC TGNSCRSQMA EGFGKFYGGD DFEVYSGGVE AHGLNSKAVE VMKEIGIDIS  60
   61 NQTSDLIDEN ILFKADYVIT LCGDARDKCP ALPPSVKSLH WELEDPARAE GTEEEIMNKF 120
  121 REVRDIIKEK VKALIEEIRE KSLA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.39794
Match:	1jl3A
Description:	Arsenate reductase ArsC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoprotein phosphatase activity	6.43875885805397	bayes_pls_golite062009
phosphatase activity	5.72722663503511	bayes_pls_golite062009
phosphoric ester hydrolase activity	5.55026883689543	bayes_pls_golite062009
protein tyrosine phosphatase activity	4.96504058028431	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	4.83129317708469	bayes_pls_golite062009
arsenate reductase (glutaredoxin) activity	4.33079906808883	bayes_pls_golite062009
oxidoreductase activity, acting on phosphorus or arsenic in donors	4.33079906808883	bayes_pls_golite062009
oxidoreductase activity, acting on phosphorus or arsenic in donors, with disulfide as acceptor	4.33079906808883	bayes_pls_golite062009
arsenate reductase activity	4.23566798374485	bayes_pls_golite062009
hydrolase activity	3.54736349349649	bayes_pls_golite062009
catalytic activity	2.36226573018655	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: