YRC Public Data Repository - Protein Structure Prediction

Protein:	SAC3_ARATH
Organism:	Arabidopsis thaliana
Length:	818 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAC3_ARATH.

Description	E-value	Query Range	Subject Range
SAC4_ARATH - Phosphoinositide phosphatase SAC4 OS=Arabidopsis thaliana GN=SAC4 PE=2 SV=1	687.0	[0..14]	[818..23]
gi\|215768478, gi... - gi\|51964610\|ref\|XP_507089.1\| PREDICTED P0007D08.10-1 gene product [Oryza sativa (japonica cultivar-g...	653.0	[0..1]	[816..1]
gi\|110225894, gi... - gi\|149027752\|gb\|EDL83246.1\| rCG38206, isoform CRA_b [Rattus norvegicus], gi\|114052238\|ref\|NP_0010405...	636.0	[0..6]	[809..3]
gi\|169775859 - gi\|169775859\|ref\|XP_001822396.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83771131 - gi\|83771131\|dbj\|BAE61263.1\| unnamed protein product [Aspergillus oryzae]	634.0	[0..2]	[794..127]
gi\|28923339, gi\|... - gi\|32418670\|ref\|XP_329813.1\| hypothetical protein [Neurospora crassa], gi\|28923339\|gb\|EAA32532.1\| hy... gi\|85104596 - gi\|85104596\|ref\|XP_961768.1\| hypothetical protein [Neurospora crassa OR74A]	633.0	[0..2]	[788..139]
gi\|73973735, gi\|... - gi\|73973735\|ref\|XP_532259.2\| PREDICTED: similar to SAC domain-containing protein 3 isoform 1 [Canis ...	633.0	[0..6]	[808..3]
gi\|167830421, gi... - gi\|167830421\|ref\|NP_001108096.1\| FIG4 homolog [Pan troglodytes], gi\|114608993\|ref\|XP_518683.2\| PREDI...	631.0	[0..11]	[808..95]
gi\|38111109, gi\|... - gi\|39971551\|ref\|XP_367166.1\| hypothetical protein MGG_07091 [Magnaporthe grisea 70-15], gb\|EAA56736....	630.0	[0..4]	[806..139]

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Predicted Domain #1

Region A:
Residues: [1-176]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTDDAGT TTHSLQEFKL FETQSNFYMI GWDGSGVYRV LKIDRLDPSE LNISQDSTHY  60
   61 TKKECYELLK RIHEGNKATG GLKLVTLCYG IIGFVKFLGP YYMLLITERR HIGDLFGHSV 120
  121 YAVSKSEIVA LHNSTVQCNF ANSRDENRYK RLLCMVDLTK DFFFSYSYNV MRSYQK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [177-334]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVCNYETGHN LYEKMFVWNE FLTRGIRHHL RNTLWTVALV YGFFKQASLS ESGKDFKITL  60
   61 IARRSRHNAG TRYLKRGVNR NGDVANDVET EQIVSEDVPE DHPMQISSVV QNRGSIPLFW 120
  121 SQETSRLNLK PDIVLSKKEP NYEATRLHFD NLVERYGN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [335-424]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIIILNLIKT KERRPRESIL REEFVNAIDF INKDLPEENR LRFLHWDLHK HFRSKTKNVL  60
   61 ALLCKVATCA LMLTDLFYYQ VTPAMTIEDS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [425-602]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSSSDAD TGDISPHTSS DDDNGDHDSL EKKSSRSKNI AYGKCDVKPP RLQSGVLRTN  60
   61 CIDCLDRTNV AQYAYGWAAL GQQLHVLGIR DVPAIELDDP LAISLMGLYE RMGDTLAHQY 120
  121 GGSAAHNKVF SERRGQWRAA TQSQEFLRTL QRYYNNAYMD ADKQDAINIF LGTFQPEQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [603-818]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMPAIWELRS NSLSNGRNGE MNIGKDERFL VKRCLSDGDF LHESCTPLSA MSSNHESMPQ  60
   61 KGFSAPLQHV SHILSESSSD IPVSNDVALS RCTPSMPRKQ LFGDVQKVHR FGSDQVYFGG 120
  121 EEDMSSVSNF VDIEWLSSEN PCENALFDRS SELTRNLTAE TSSTENSVNG VGQSAPTISE 180
  181 SGSSSSKGKE PMGTKIREDF PDSFKEWVAY GEALCH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.30103
Match:	1i9yA
Description:	Synaptojanin, IPP5C domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits