YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22775693, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	228 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22775693, gi|....

Description	E-value	Query Range	Subject Range
gi\|49328248, gi\|... - gi\|49476692\|ref\|YP_034374.1\| deoxynucleoside kinase [Bacillus thuringiensis serovar konkukian str. 9... gi\|49183053, gi\|... - gi\|49183053\|ref\|YP_026305.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. Sterne],... gi\|47525270, gi\|... - gi\|47525270\|ref\|YP_016619.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. 'Ames An... gi\|118475792, gi... - gi\|118475792\|ref\|YP_892943.1\| deoxynucleoside kinase [Bacillus thuringiensis str. Al Hakam], gi\|1184... gi\|42735011, gi\|... - gi\|42779096\|ref\|NP_976343.1\| deoxynucleoside kinase family protein [Bacillus cereus ATCC 10987], gi\|... gi\|30260208, gi\|... - gi\|30260208\|ref\|NP_842585.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. Ames], g... gi\|21397984, gi\|... - gi\|65317481\|ref\|ZP_00390440.1\| COG1428: Deoxynucleoside kinases [Bacillus anthracis str. A2012], ref... gi\|228931521, gi... - gi\|228931521\|ref\|ZP_04094429.1\| hypothetical protein bthur0009_160 [Bacillus thuringiensis serovar a... gi\|228815849, gi... - gi\|228943825\|ref\|ZP_04106212.1\| hypothetical protein bthur0007_80 [Bacillus thuringiensis serovar mo... gi\|228803216, gi... - gi\|228956459\|ref\|ZP_04118257.1\| hypothetical protein bthur0005_70 [Bacillus thuringiensis serovar pa... gi\|228963116, gi... - gi\|228963116\|ref\|ZP_04124287.1\| hypothetical protein bthur0004_90 [Bacillus thuringiensis serovar so... gi\|228970207, gi... - gi\|228970207\|ref\|ZP_04130868.1\| hypothetical protein bthur0003_70 [Bacillus thuringiensis serovar th... gi\|228776454, gi... - gi\|228983274\|ref\|ZP_04143489.1\| hypothetical protein bthur0001_70 [Bacillus thuringiensis serovar to... gi\|228715335, gi... - gi\|229067782\|ref\|ZP_04201101.1\| hypothetical protein bcere0025_80 [Bacillus cereus F65185], gi\|22871... gi\|228709042, gi... - gi\|229074079\|ref\|ZP_04207128.1\| hypothetical protein bcere0024_80 [Bacillus cereus Rock4-18], gi\|228... gi\|229089151, gi... - gi\|229089151\|ref\|ZP_04220434.1\| hypothetical protein bcere0021_80 [Bacillus cereus Rock3-42], gi\|228... gi\|229094739, gi... - gi\|229094739\|ref\|ZP_04225747.1\| hypothetical protein bcere0020_80 [Bacillus cereus Rock3-29], gi\|228... gi\|228682612, gi... - gi\|229100805\|ref\|ZP_04231623.1\| hypothetical protein bcere0019_170 [Bacillus cereus Rock3-28], gi\|22... gi\|229107704, gi... - gi\|229107704\|ref\|ZP_04237342.1\| hypothetical protein bcere0018_70 [Bacillus cereus Rock1-15], gi\|228... gi\|229113693, gi... - gi\|229113693\|ref\|ZP_04243130.1\| hypothetical protein bcere0017_80 [Bacillus cereus Rock1-3], gi\|2286... gi\|228663772, gi... - gi\|229119681\|ref\|ZP_04248944.1\| hypothetical protein bcere0016_80 [Bacillus cereus 95/8201], gi\|2286... gi\|229125535, gi... - gi\|229125535\|ref\|ZP_04254569.1\| hypothetical protein bcere0015_70 [Bacillus cereus BDRD-Cer4], gi\|22... gi\|228646597, gi... - gi\|229136862\|ref\|ZP_04265491.1\| hypothetical protein bcere0013_80 [Bacillus cereus BDRD-ST26], gi\|22... gi\|229142824, gi... - gi\|229142824\|ref\|ZP_04271268.1\| hypothetical protein bcere0012_70 [Bacillus cereus BDRD-ST24], gi\|22... gi\|229153798, gi... - gi\|229153798\|ref\|ZP_04281930.1\| hypothetical protein bcere0010_70 [Bacillus cereus ATCC 4342], gi\|22... gi\|229182413, gi... - gi\|229182413\|ref\|ZP_04309666.1\| hypothetical protein bcere0004_80 [Bacillus cereus BGSC 6E1], gi\|228... gi\|228595171, gi... - gi\|229188303\|ref\|ZP_04315354.1\| hypothetical protein bcere0002_80 [Bacillus cereus ATCC 10876], gi\|2... gi\|228589065, gi... - gi\|229194409\|ref\|ZP_04321214.1\| hypothetical protein bcere0001_70 [Bacillus cereus m1293], gi\|228589... gi\|229266412, gi... - gi\|229602004\|ref\|YP_002864670.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A024... gi\|254686607 - gi\|254686607\|ref\|ZP_05150466.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. CNEVA... gi\|254724160 - gi\|254724160\|ref\|ZP_05185945.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A1055... gi\|254737005 - gi\|254737005\|ref\|ZP_05194710.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. Weste... gi\|254744203 - gi\|254744203\|ref\|ZP_05201884.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. Kruge... gi\|87312649 - gi\|87312649\|gb\|ABD37690.1\| deoxyadenosine kinase [Bacillus cereus] gi\|254751194 - gi\|254751194\|ref\|ZP_05203233.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. Vollu... gi\|254761664 - gi\|254761664\|ref\|ZP_05213682.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. Austr... gi\|206978357, gi... - gi\|206978357\|ref\|ZP_03239231.1\| deoxynucleoside kinase family protein [Bacillus cereus H3081.97], gi... gi\|196047684, gi... - gi\|196047684\|ref\|ZP_03114888.1\| deoxynucleoside kinase family protein [Bacillus cereus 03BB108], gi\|... gi\|218235731, gi... - gi\|218235731\|ref\|YP_002364869.1\| deoxynucleoside kinase family protein [Bacillus cereus B4264], gi\|2... gi\|217957595, gi... - gi\|217957595\|ref\|YP_002336137.1\| deoxynucleoside kinase family protein [Bacillus cereus AH187], gi\|2... gi\|218535460, gi... - gi\|218901220\|ref\|YP_002449054.1\| deoxynucleoside kinase family protein [Bacillus cereus AH820], gi\|2... gi\|218895155, gi... - gi\|218895155\|ref\|YP_002443566.1\| deoxynucleoside kinase family protein [Bacillus cereus G9842], gi\|2... gi\|221237834, gi... - gi\|222093788\|ref\|YP_002527836.1\| deoxynucleoside kinase [Bacillus cereus Q1], gi\|221237834\|gb\|ACM105... gi\|167635104, gi... - gi\|167635104\|ref\|ZP_02393421.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A0442... gi\|164711033, gi... - gi\|165873235\|ref\|ZP_02217846.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A0488... gi\|170707582, gi... - gi\|170707582\|ref\|ZP_02898035.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A0389... gi\|170688914, gi... - gi\|170688914\|ref\|ZP_02880116.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A0465... gi\|190559557, gi... - gi\|190569335\|ref\|ZP_03022227.1\| deoxynucleoside kinase family protein [Bacillus anthracis Tsiankovsk... gi\|172080016, gi... - gi\|177655676\|ref\|ZP_02937001.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. A0174... gi\|196041959, gi... - gi\|196041959\|ref\|ZP_03109246.1\| deoxynucleoside kinase family protein [Bacillus cereus NVH0597-99], ... gi\|196036402, gi... - gi\|196036402\|ref\|ZP_03103799.1\| deoxynucleoside kinase family protein [Bacillus cereus W], gi\|195991... gi\|225790347, gi... - gi\|225862071\|ref\|YP_002747449.1\| deoxynucleoside kinase family protein [Bacillus cereus 03BB102], gi... gi\|227812692, gi... - gi\|227812692\|ref\|YP_002812701.1\| deoxynucleoside kinase family protein [Bacillus anthracis str. CDC ... gi\|228898772, gi... - gi\|228898772\|ref\|ZP_04063056.1\| hypothetical protein bthur0014_80 [Bacillus thuringiensis IBL 4222],... gi\|228853823, gi... - gi\|228905815\|ref\|ZP_04069714.1\| hypothetical protein bthur0013_80 [Bacillus thuringiensis IBL 200], ... gi\|228912757, gi... - gi\|228912757\|ref\|ZP_04076406.1\| hypothetical protein bthur0012_80 [Bacillus thuringiensis serovar pu... gi\|228918969, gi... - gi\|228918969\|ref\|ZP_04082350.1\| hypothetical protein bthur0011_70 [Bacillus thuringiensis serovar hu... gi\|228925272, gi... - gi\|228925272\|ref\|ZP_04088370.1\| hypothetical protein bthur0010_80 [Bacillus thuringiensis serovar po...	174.0	[0..1]	[222..1]
gi\|228652438, gi... - gi\|229131026\|ref\|ZP_04259942.1\| hypothetical protein bcere0014_80 [Bacillus cereus BDRD-ST196], gi\|2... gi\|229053865, gi... - gi\|229053865\|ref\|ZP_04195302.1\| hypothetical protein bcere0026_80 [Bacillus cereus AH603], gi\|228721... gi\|89153509, gi\|... - gi\|89208562\|ref\|ZP_01187062.1\| Deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4], gi\|891535... gi\|229165008, gi... - gi\|229165008\|ref\|ZP_04292806.1\| hypothetical protein bcere0007_80 [Bacillus cereus AH621], gi\|228618... gi\|228751740, gi... - gi\|229009529\|ref\|ZP_04166758.1\| hypothetical protein bmyco0001_80 [Bacillus mycoides DSM 2048], gi\|2...	173.0	[0..1]	[222..1]
gi\|52145195, gi\|... - gi\|52145195\|ref\|YP_081633.1\| deoxynucleoside kinase [Bacillus cereus E33L], gi\|51978664\|gb\|AAU20214....	172.0	[0..1]	[222..1]
gi\|89100959, gi\|... - gi\|89100959\|ref\|ZP_01173805.1\| deoxynucleoside kinase [Bacillus sp. NRRL B-14911], gi\|89084330\|gb\|EA...	170.0	[0..1]	[222..1]
gi\|152973867, gi... - gi\|89203309\|ref\|ZP_01181990.1\| Deoxynucleoside kinase [Bacillus cereus subsp. cytotoxis NVH 391-98],...	166.0	[0..1]	[222..1]
gi\|251809979, gi... - gi\|251809979\|ref\|ZP_04824452.1\| deoxynucleoside kinase [Staphylococcus epidermidis BCM-HMP0060], gi\|... gi\|242234673, gi... - gi\|242241895\|ref\|ZP_04796340.1\| deoxynucleoside kinase [Staphylococcus epidermidis W23144], gi\|24223... gi\|57636836, gi\|... - gi\|57866178\|ref\|YP_187798.1\| deoxynucleoside kinase family protein [Staphylococcus epidermidis RP62A...	165.0	[0..4]	[218..1]
gi\|70727435, gi\|... - gi\|70727435\|ref\|YP_254351.1\| hypothetical protein SH2436 [Staphylococcus haemolyticus JCSC1435], gi\|...	165.0	[0..4]	[222..1]
gi\|221321341 - gi\|221321341\|ref\|ZP_03602635.1\| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtil... gi\|221312145 - gi\|221312145\|ref\|ZP_03593950.1\| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtil... YAAF_BACSU, DCK_... - Uncharacterized protein yaaF OS=Bacillus subtilis GN=yaaF PE=4 SV=1, Deoxyadenosine/deoxycytidine ki... DCK_BACSU - Deoxyadenosine/deoxycytidine kinase OS=Bacillus subtilis (strain 168) GN=dck PE=1 SV=1 gi\|221317078 - gi\|221317078\|ref\|ZP_03598372.1\| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtil...	165.0	[0..4]	[219..1]
gi\|72495982, gi\|... - gi\|73663467\|ref\|YP_302248.1\| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp. sap...	164.0	[0..4]	[222..1]
gi\|27467243, gi\|... - gi\|27467243\|ref\|NP_763880.1\| deoxypurine kinase [Staphylococcus epidermidis ATCC 12228], gi\|27314786...	164.0	[0..4]	[218..1]

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Predicted Domain #1

Region A:
Residues: [1-228]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLREKYQIP NDSIITIAGT VGVGKSTMTN ALAEALHFKT SFEKVDSNPY LSDFYNDFER  60
   61 WSFHLQIYFL AERFKEQKKI FEYGGGFIQD RSIYEDTGIF AKMHYDNGTM NPTDYDTYKS 120
  121 LFDAMVMTPY FPHPDLLIYL EGSFDEIVSR IKSRGRDMEK NTPIEYWEEM YRRYSDWIDN 180
  181 FNACPVLRIN ISDYDLMKED DSLALILEKI GRSIQLSRKY KKGEIITN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.154902
Match:	2a2zA
Description:	Crystal Structure of human deoxycytidine kinase in complex with deoxycytidine and uridine diphosphate
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits