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View Structure Prediction Details

Protein: gi|23098506, gi|...
Organism: Oceanobacillus iheyensis HTE831
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23098506, gi|....

Description E-value Query
Range
Subject
Range
gi|109451848, gi... - gi|109451848|emb|CAK54795.1| C22orf25 [synthetic construct], gi|109451270|emb|CAK54496.1| C22orf25 [...
HGNC:25439|Ensem... - 22 open reading frame 25
C22orf25 - chromosome 22 open reading frame 25
363.0 [0..1] [255..1]
gi|73995915 - gi|73995915|ref|XP_850154.1| PREDICTED: similar to Ser/Thr-rich protein T10 in DGCR region [Canis fa...
359.0 [0..1] [255..1]
gi|39982662, gi|... - gi|39995898|ref|NP_951849.1| hypothetical protein GSU0792 [Geobacter sulfurreducens PCA], gi|3998266...
356.0 [0..1] [254..1]
gi|74219739, gi|... - gi|74227275|dbj|BAE21736.1| unnamed protein product [Mus musculus], gi|74219739|dbj|BAE40462.1| unna...
352.0 [0..1] [255..1]
gi|149019786, gi... - gi|62658192|ref|XP_341011.2| PREDICTED: similar to Ser/Thr-rich protein T10 in DGCR region [Rattus n...
347.0 [0..1] [255..1]
TNG2_BOVIN - Transport and Golgi organization protein 2 homolog OS=Bos taurus GN=TANGO2 PE=2 SV=1
338.0 [0..1] [255..1]
gi|94310770, gi|... - gi|94310770|ref|YP_583980.1| hypothetical protein Rmet_1832 [Ralstonia metallidurans CH34], gi|93354...
332.0 [0..1] [254..1]
gi|39645613, gi|... - gi|39645613|gb|AAH63724.1| MGC68627 protein [Xenopus laevis], gi|148228476|ref|NP_001083694.1| hypot...
331.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLITFAIQK HSEYPFILIA NRDEFYDRPT AKASFWDDAP AILAGRDLKS KGTWLGITKQ  60
   61 GKIAAITNYR NPSLPETGTY SRGKIPVDFL NNEIDASHFL SRLEENKSLY AGYNALFGNY 120
  121 QNLYTYNNIY NSSEQL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.438 N/A N/A d.93.1 SH2 domain
View Download 0.415 N/A N/A d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
View Download 0.351 N/A N/A d.93.1 SH2 domain
View Download 0.335 N/A N/A d.129.1 TATA-box binding protein-like
View Download 0.314 N/A N/A d.237.1 Hypothetical protein YjiA, C-terminal domain

Predicted Domain #2
Region A:
Residues: [137-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSGIHSLSND KLNTPWPKVV KARGLLQNHL ESNQDISNEA LFRILQNADK PNDQDLPDTG  60
   61 IGLQLERNLS SMFIDTGNYG TRASTIILID KNNDATFIER TYHQGNVIED KNYYFSIVSD 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.571 N/A N/A d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
View Download 0.483 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.441 N/A N/A b.47.1 Trypsin-like serine proteases
View Download 0.433 N/A N/A b.55.1 PH domain-like
View Download 0.430 N/A N/A d.81.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle