YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23099450, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	158 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23099450, gi|....

Description	E-value	Query Range	Subject Range
MRPE_BACSU - Na(+)/H(+) antiporter subunit E OS=Bacillus subtilis GN=mrpE PE=1 SV=1 gi\|50812287, gi\|... - gi\|50812287\|ref\|YP_054591.1\| putative monovalent cation/H+ antiporter subunit E [Bacillus subtilis s...	169.0	[0..1]	[158..1]
gi\|15613878, gi\|... - gi\|15613878\|ref\|NP_242181.1\| putative monovalent cation/H+ antiporter subunit E [Bacillus halodurans... gi\|25345883 - pir\|\|C83814 Na+/H+ antiporter BH1315 [imported] - Bacillus halodurans (strain C-125)	166.0	[0..1]	[157..1]
gi\|154163172 - gi\|154163172\|gb\|ABS70477.1\| MrpE [synthetic construct] MRPE_BACPE - Na(+)/H(+) antiporter subunit E OS=Bacillus pseudofirmus (strain OF4) GN=mrpE PE=1 SV=1 gi\|6650387 - gi\|6650387\|gb\|AAF21816.1\|AF097740_5 multiple resistance and pH regulation related protein E [Bacillu... MRPE_BACPF - Na(+)/H(+) antiporter subunit E OS=Bacillus pseudofirmus GN=mrpE PE=1 SV=1	166.0	[0..1]	[158..1]
gi\|39997437, gi\|... - gi\|39997437\|ref\|NP_953388.1\| putative monovalent cation/H+ antiporter subunit E [Geobacter sulfurred...	161.0	[0..4]	[158..3]
gi\|68189865, gi\|... - gi\|69279609\|ref\|ZP_00614415.1\| Protein of unknown function DUF68 [Mesorhizobium sp. BNC1], gi\|681898...	158.0	[0..6]	[158..5]
gi\|56963396, gi\|... - gi\|56963396\|ref\|YP_175127.1\| multiple resistance and pH regulation related protein MrpC [Bacillus cl...	157.0	[0..1]	[158..1]
gi\|106772731, gi... - gi\|148656224\|ref\|YP_001276429.1\| putative monovalent cation/H+ antiporter subunit E [Roseiflexus sp....	156.0	[0..5]	[157..2]
MNHE1_STAS1 - Na(+)/H(+) antiporter subunit E1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 1...	155.0	[0..1]	[156..1]
gi\|89085023, gi\|... - gi\|89100285\|ref\|ZP_01173151.1\| hypothetical protein B14911_24676 [Bacillus sp. NRRL B-14911], gi\|890...	155.0	[0..1]	[158..1]
gi\|21241232, gi\|... - gi\|21241232\|ref\|NP_640814.1\| putative monovalent cation/H+ antiporter subunit E [Xanthomonas axonopo...	155.0	[0..7]	[157..17]

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Predicted Domain #1

Region A:
Residues: [1-158]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFQILLNVL IAFLWMFLQN DYTAITFVVG YLIGILLLFF IRRFLKSEFY FKRVWAAIKL  60
   61 IFLFLKELIK ANIDVVRIVL SPKLNNEPGI VAVETKLETN LEISLLAALI TLTPGTVSMD 120
  121 FSPDSKTIYV HAIDVPDREE VIRDVQNTFE RAIMEVTK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	16.408935
Match:	PF01899.7
Description:	No description for PF01899.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits