YRC Public Data Repository - Protein Structure Prediction

Protein:	ALG12_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	551 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG12_YEAST.

Description	E-value	Query Range	Subject Range
gi\|207341568 - gi\|207341568\|gb\|EDZ69587.1\| YNR030Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi\|190408973 - gi\|190408973\|gb\|EDV12238.1\| mannosyltransferase [Saccharomyces cerevisiae RM11-1a] ALG12_YEAST - Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Saccharomyces cerevisiae (strain A... ALG12 - Alpha-1,6-mannosyltransferase localized to the ER; responsible for the addition of the alpha-1,6 man... gi\|151944557 - gi\|151944557\|gb\|EDN62835.1\| dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase [Saccharomy...	0.0	[1..551]	[1..551]
ALG12_MOUSE, AG1... - Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Mus musculus GN=Alg12 PE=2 SV=1, (...	0.0	[3..470]	[12..445]
gi\|220948018 - gi\|220948018\|gb\|ACL86552.1\| CG8412-PA [synthetic construct] CG8412-PA - This gene is referred to in FlyBase by the symbol Dmel\CG8412 (CG8412, FBgn0037743). It is a protein...	0.0	[6..462]	[1..425]
ALG12 - asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae) HGNC:19358\|MIM:6... - glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae) gi\|123986184, gi... - gi\|123998972\|gb\|ABM87075.1\| asparagine-linked glycosylation 12 homolog (S. cerevisiae, alpha-1,6-man...	0.0	[2..470]	[9..447]
gi\|18417492, gi\|... - gi\|21464563\|gb\|AAM52236.1\| AT5g14850/T9L3_150 [Arabidopsis thaliana], gi\|18417492\|ref\|NP_568305.1\| m...	1.0E-99	[2..465]	[39..504]
CE29152 - status:Confirmed UniProt:Q23361 protein_id:AAC48267.3	2.0E-95	[9..461]	[7..431]

Back

Predicted Domain #1

Region A:
Residues: [1-407]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWSVLDTVL LTVISFHLIQ APFTKVEESF NIQAIHDILT YSVFDISQYD HLKFPGVVPR  60
   61 TFVGAVIIAM LSRPYLYLSS LIQTSRPTSI DVQLVVRGIV GLTNGLSFIY LKNCLQDMFD 120
  121 EITEKKKEEN EDKDIYIYDS AGTWFLLFLI GSFHLMFYST RTLPNFVMTL PLTNVALGWV 180
  181 LLGRYNAAIF LSALVAIVFR LEVSALSAGI ALFSVIFKKI SLFDAIKFGI FGLGLGSAIS 240
  241 ITVDSYFWQE WCLPEVDGFL FNVVAGYASK WGVEPVTAYF THYLRMMFMP PTVLLLNYFG 300
  301 YKLAPAKLKI VSLASLFHII VLSFQPHKEW RFIIYAVPSI MLLGATGAAH LWENMKVKKI 360
  361 TNVLCLAILP LSIMTSFFIS MAFLYISRMN YPGGEALTSF NDMIVEK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [408-551]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NITNATVHIS IPPCMTGVTL FGELNYGVYG INYDKTENTT LLQEMWPSFD FLITHEPTAS  60
   61 QLPFENKTTN HWELVNTTKM FTGFDPTYIK NFVFQERVNV LSLLKQIIFD KTPTVFLKEL 120
  121 TANSIVKSDV FFTYKRIKQD EKTD

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [405-551]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEKNITNATV HISIPPCMTG VTLFGELNYG VYGINYDKTE NTTLLQEMWP SFDFLITHEP  60
   61 TASQLPFENK TTNHWELVNT TKMFTGFDPT YIKNFVFQER VNVLSLLKQI IFDKTPTVFL 120
  121 KELTANSIVK SDVFFTYKRI KQDEKTD

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits