YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22778520, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	283 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22778520, gi|....

Description	E-value	Query Range	Subject Range
gi\|25487769 - pir\|\|D84112 glycerophosphoryl diester phosphodiesterase glpQ [imported] - Bacillus halodurans (strai... gi\|10176324, gi\|... - gi\|15616262\|ref\|NP_244567.1\| glycerophosphoryl diester phosphodiesterase [Bacillus halodurans C-125]...	280.0	[0..1]	[283..1]
gi\|221312349 - gi\|221312349\|ref\|ZP_03594154.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis (strain 168) GN=glpQ PE=3 SV=1 GLPQ_BACSU - Glycerophosphoryl diester phosphodiesterase OS=Bacillus subtilis GN=glpQ PE=3 SV=1 gi\|221321546 - gi\|221321546\|ref\|ZP_03602840.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp... gi\|221317282 - gi\|221317282\|ref\|ZP_03598576.1\| glycerophosphoryl diester phosphodiesterase [Bacillus subtilis subsp...	248.0	[0..3]	[281..1]
gi\|52787833, gi\|... - gi\|52787833\|ref\|YP_093662.1\| hypothetical protein BLi04156 [Bacillus licheniformis ATCC 14580], gi\|5...	247.0	[0..1]	[274..1]
gi\|49477820, gi\|... - gi\|49477820\|ref\|YP_036772.1\| glycerophosphoryl diester phosphodiesterase [Bacillus thuringiensis ser...	245.0	[0..1]	[281..1]
gi\|163940424, gi... - gi\|89208634\|ref\|ZP_01187130.1\| Glycerophosphodiester phosphodiesterase [Bacillus weihenstephanensis ...	245.0	[0..1]	[281..1]
gi\|51976296, gi\|... - gi\|52142827\|ref\|YP_084004.1\| glycerophosphoryl diester phosphodiesterase [Bacillus cereus E33L], gi\|...	245.0	[0..1]	[281..1]
gi\|42781761, gi\|... - gi\|42781761\|ref\|NP_979008.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus cereus ...	243.0	[0..1]	[281..1]
gi\|190565394, gi... - gi\|190565394\|ref\|ZP_03018314.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anthr... gi\|172084419, gi... - gi\|177649345\|ref\|ZP_02932347.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anthr... gi\|170704573, gi... - gi\|170704573\|ref\|ZP_02895039.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anthr... gi\|167514235, gi... - gi\|167637686\|ref\|ZP_02395965.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anthr... gi\|254760525 - gi\|254760525\|ref\|ZP_05212549.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anthr... gi\|49179419, gi\|... - gi\|49185492\|ref\|YP_028744.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus anthrac... gi\|254737689 - gi\|254737689\|ref\|ZP_05195392.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anthr... gi\|47503107, gi\|... - gi\|47527959\|ref\|YP_019308.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus anthrac... gi\|229600950, gi... - gi\|229600950\|ref\|YP_002866966.1\| putative glycerophosphoryl diester phosphodiesterase [Bacillus anth... gi\|30257283, gi\|... - gi\|30262651\|ref\|NP_845028.1\| glycerophosphoryl diester phosphodiesterase, putative [Bacillus anthrac...	243.0	[0..1]	[281..1]
gi\|223488779, gi... - gi\|254479407\|ref\|ZP_05092739.1\| Glycerophosphoryl diester phosphodiesterase family protein [Carboxyd... gi\|20807473 - gi\|20807473\|ref\|NP_622644.1\| Glycerophosphoryl diester phosphodiesterase [Thermoanaerobacter tengcon... gi\|20807473, gi\|... - gi\|20807473\|ref\|NP_622644.1\| glycerophosphoryl diester phosphodiesterase [Thermoanaerobacter tengcon...	242.0	[0..38]	[282..2]

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Predicted Domain #1

Region A:
Residues: [1-283]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKLIFTLL VALIFLSVFT SPAFASNAET KGNPHHKKVV NVAHRGASGH APENTIAAFD  60
   61 KAFQMKSDFI EIDVQMTADG KLIAIHDTTV NRTTDGTGSV SDYTLEEIQQ LDAGSWFGEE 120
  121 FAGEQIPTFE EILDKYRGKI GILIELKSPE LYPGMEQKVA EALKERNMDK PRNGKIIVQS 180
  181 FNHESVQLSK ELLPRIPHGV LAGMSWADVT GEELEEFATY ADYFNPNMNI ANEDLIDRVH 240
  241 GKDMKMWPYT VRTQEQADRL LDLKVDGIIT DFPEYVHRHP GKN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	59.0
Match:	2oogA
Description:	No description for 2oogA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits