| Protein: | FRE3_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 711 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRE3_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..711] | [1..711] |
|
|
0.0 | [23..708] | [186..944] |
|
|
0.0 | [30..708] | [204..962] |
|
|
0.0 | [25..708] | [122..867] |
|
|
0.0 | [30..708] | [204..962] |
|
|
0.0 | [23..708] | [186..977] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MYWVLLCGSI LLCCLSGASA SPAKTKMYGK LPLVLTDACM GVLGEVTWEY SSDDLYSSPA 60
61 CTYEPALQSM LYCIYESLNE KGYSNRTFEK TFAAIKEDCA YYTDNLQNMT NADFYNMLNN 120
121 GTTYIIQYSE GSANLTYPIE MDAQVRENYY YSYHGFYANY DIGHTYGGII CAYFVGVMIL 180
181 ASILHYLS
|
| Detection Method: |  |
| Confidence: | 4.30103 |
| Match: | 1g8iA_ |
| Description: | Frequenin (neuronal calcium sensor 1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cation binding | 2.62077305565026 | bayes_pls_golite062009 |
| metal ion binding | 2.62077305565026 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.61874575467092 | bayes_pls_golite062009 |
| ion binding | 2.61312132078717 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.57032504567157 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.55650624542181 | bayes_pls_golite062009 |
| binding | 2.54774920478325 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.37465721152046 | bayes_pls_golite062009 |
| cation channel activity | 1.49312394054212 | bayes_pls_golite062009 |
| calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
| transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
| protein binding | 1.06263369232144 | bayes_pls_golite062009 |
| channel activity | 1.05847414989139 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.05847414989139 | bayes_pls_golite062009 |
| ion channel activity | 1.0369591011376 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.03529144716694 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.986621437232479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.910148857310729 | bayes_pls_golite062009 |
| potassium channel activity | 0.906643355854798 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.896351900356978 | bayes_pls_golite062009 |
| gated channel activity | 0.855502499003241 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 0.810245330492755 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.693724160233023 | bayes_pls_golite062009 |
| transcription regulator activity | 0.529057692398468 | bayes_pls_golite062009 |
| molecular transducer activity | 0.503769734882556 | bayes_pls_golite062009 |
| signal transducer activity | 0.503769734882556 | bayes_pls_golite062009 |
| hydrolase activity | 0.378268353045111 | bayes_pls_golite062009 |
| nucleic acid binding | 0.345084390599452 | bayes_pls_golite062009 |
| 0.34446792626966 | bayes_pls_golite062009 | |
| channel regulator activity | 0.32809521759917 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
| DNA binding | 0.14285249145193 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0776924650284998 | bayes_pls_golite062009 |
|
Region A: Residues: [189-356] |
1 11 21 31 41 51
| | | | | |
1 YTPFKTALFK QRLVRYVRRY LTIPTIWGKH ASSFSYLKIF TGFLPTRSEG VIILGYLVLH 60
61 TVFLAYGYQY DPYNLIFDSR REQIARYVAD RSGVLAFAHF PLIALFAGRN NFLEFISGVK 120
121 YTSFIMFHKW LGRMMFLDAV IHGAAYTSYS VFYKDWAASK EETYWQFG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [357-529] |
1 11 21 31 41 51
| | | | | |
1 VAALCIVGVM VFFSLAMFRK FFYEAFLFLH IVLGALFFYT CWEHVVELSG IEWIYAAIAI 60
61 WTIDRLIRIV RVSYFGFPKA SLQLVGDDII RVTVKRPVRL WKAKPGQYVF VSFLHHLYFW 120
121 QSHPFTVLDS IIKDGELTII LKEKKGVTKL VKKYVCCNGG KASMRLAIEG PYG
|
| Detection Method: | |
| Confidence: | 51.30103 |
| Match: | 1ndh__ |
| Description: | cytochrome b5 reductase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [530-711] |
1 11 21 31 41 51
| | | | | |
1 SSSPVNNYDN VLLLTGGTGL PGPIAHAIKL GKTSAATGKQ FIKLVIAVRG FNVLEAYKPE 60
61 LMCLEDLNVQ LHIYNTMEVP ALTPNDSLEI SQQDEKADGK GVVMATTLEQ SPNPVEFDGT 120
121 VFHHGRPNVE KLLHEVGDLN GSLAVVCCGP PVFVDEVRDQ TANLVLEKPA KAIEYFEEYQ 180
181 SW
|
| Detection Method: | |
| Confidence: | 51.30103 |
| Match: | 1ndh__ |
| Description: | cytochrome b5 reductase |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.45374095556065 | bayes_pls_golite062009 |
| transferase activity | 1.15480450573972 | bayes_pls_golite062009 |
| binding | 1.13408475648113 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.27336340260908 | bayes_pls_golite062009 |
| protein binding | 0.144900113694048 | bayes_pls_golite062009 |
| cofactor binding | 0.0731141170494622 | bayes_pls_golite062009 |
