Protein: | FRE3_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 711 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRE3_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..711] | [1..711] |
|
0.0 | [23..708] | [186..944] |
|
0.0 | [30..708] | [204..962] |
|
0.0 | [25..708] | [122..867] |
|
0.0 | [30..708] | [204..962] |
|
0.0 | [23..708] | [186..977] |
Region A: Residues: [1-188] |
1 11 21 31 41 51 | | | | | | 1 MYWVLLCGSI LLCCLSGASA SPAKTKMYGK LPLVLTDACM GVLGEVTWEY SSDDLYSSPA 60 61 CTYEPALQSM LYCIYESLNE KGYSNRTFEK TFAAIKEDCA YYTDNLQNMT NADFYNMLNN 120 121 GTTYIIQYSE GSANLTYPIE MDAQVRENYY YSYHGFYANY DIGHTYGGII CAYFVGVMIL 180 181 ASILHYLS |
Detection Method: | |
Confidence: | 4.30103 |
Match: | 1g8iA_ |
Description: | Frequenin (neuronal calcium sensor 1) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
cation binding | 2.62077305565026 | bayes_pls_golite062009 |
metal ion binding | 2.62077305565026 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 2.61874575467092 | bayes_pls_golite062009 |
ion binding | 2.61312132078717 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 2.57032504567157 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 2.55650624542181 | bayes_pls_golite062009 |
binding | 2.54774920478325 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 2.37465721152046 | bayes_pls_golite062009 |
cation channel activity | 1.49312394054212 | bayes_pls_golite062009 |
calcium ion binding | 1.40919295397643 | bayes_pls_golite062009 |
transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
protein binding | 1.06263369232144 | bayes_pls_golite062009 |
channel activity | 1.05847414989139 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 1.05847414989139 | bayes_pls_golite062009 |
ion channel activity | 1.0369591011376 | bayes_pls_golite062009 |
substrate-specific channel activity | 1.03529144716694 | bayes_pls_golite062009 |
voltage-gated cation channel activity | 0.986621437232479 | bayes_pls_golite062009 |
transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
voltage-gated ion channel activity | 0.910148857310729 | bayes_pls_golite062009 |
potassium channel activity | 0.906643355854798 | bayes_pls_golite062009 |
voltage-gated channel activity | 0.896351900356978 | bayes_pls_golite062009 |
gated channel activity | 0.855502499003241 | bayes_pls_golite062009 |
voltage-gated potassium channel activity | 0.810245330492755 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.693724160233023 | bayes_pls_golite062009 |
transcription regulator activity | 0.529057692398468 | bayes_pls_golite062009 |
molecular transducer activity | 0.503769734882556 | bayes_pls_golite062009 |
signal transducer activity | 0.503769734882556 | bayes_pls_golite062009 |
hydrolase activity | 0.378268353045111 | bayes_pls_golite062009 |
nucleic acid binding | 0.345084390599452 | bayes_pls_golite062009 |
0.34446792626966 | bayes_pls_golite062009 | |
channel regulator activity | 0.32809521759917 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
DNA binding | 0.14285249145193 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.0776924650284998 | bayes_pls_golite062009 |
Region A: Residues: [189-356] |
1 11 21 31 41 51 | | | | | | 1 YTPFKTALFK QRLVRYVRRY LTIPTIWGKH ASSFSYLKIF TGFLPTRSEG VIILGYLVLH 60 61 TVFLAYGYQY DPYNLIFDSR REQIARYVAD RSGVLAFAHF PLIALFAGRN NFLEFISGVK 120 121 YTSFIMFHKW LGRMMFLDAV IHGAAYTSYS VFYKDWAASK EETYWQFG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [357-529] |
1 11 21 31 41 51 | | | | | | 1 VAALCIVGVM VFFSLAMFRK FFYEAFLFLH IVLGALFFYT CWEHVVELSG IEWIYAAIAI 60 61 WTIDRLIRIV RVSYFGFPKA SLQLVGDDII RVTVKRPVRL WKAKPGQYVF VSFLHHLYFW 120 121 QSHPFTVLDS IIKDGELTII LKEKKGVTKL VKKYVCCNGG KASMRLAIEG PYG |
Detection Method: | |
Confidence: | 51.30103 |
Match: | 1ndh__ |
Description: | cytochrome b5 reductase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [530-711] |
1 11 21 31 41 51 | | | | | | 1 SSSPVNNYDN VLLLTGGTGL PGPIAHAIKL GKTSAATGKQ FIKLVIAVRG FNVLEAYKPE 60 61 LMCLEDLNVQ LHIYNTMEVP ALTPNDSLEI SQQDEKADGK GVVMATTLEQ SPNPVEFDGT 120 121 VFHHGRPNVE KLLHEVGDLN GSLAVVCCGP PVFVDEVRDQ TANLVLEKPA KAIEYFEEYQ 180 181 SW |
Detection Method: | |
Confidence: | 51.30103 |
Match: | 1ndh__ |
Description: | cytochrome b5 reductase |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
catalytic activity | 1.45374095556065 | bayes_pls_golite062009 |
transferase activity | 1.15480450573972 | bayes_pls_golite062009 |
binding | 1.13408475648113 | bayes_pls_golite062009 |
oxidoreductase activity | 0.27336340260908 | bayes_pls_golite062009 |
protein binding | 0.144900113694048 | bayes_pls_golite062009 |
cofactor binding | 0.0731141170494622 | bayes_pls_golite062009 |