YRC Public Data Repository - Protein Structure Prediction

Protein:	GUP2_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	609 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUP2_YEAST.

Description	E-value	Query Range	Subject Range
GUP2_YEAST - Glycerol uptake protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GUP2 PE=3 SV=1 GUP2 - Probable membrane protein with a possible role in proton symport of glycerol; member of the MBOAT fa... gi\|151942611 - gi\|151942611\|gb\|EDN60957.1\| glycerol uptake-related protein [Saccharomyces cerevisiae YJM789]	0.0	[1..609]	[1..609]
gi\|28564970 - gi\|28564970\|gb\|AAO32569.1\| GUP1 [Saccharomyces kluyveri]	0.0	[10..609]	[1..579]
gi\|28564403 - gi\|28564403\|gb\|AAO32498.1\| GUP1 [Saccharomyces castellii]	0.0	[7..609]	[6..616]
gi\|27948827 - gi\|27948827\|gb\|AAO25613.1\| GUP1 [Kluyveromyces delphensis]	0.0	[7..609]	[3..574]
gi\|49643954, gi\|... - gi\|49643954\|emb\|CAG99906.1\| KLLA0E19185p [Kluyveromyces lactis], gi\|28565034\|gb\|AAO32600.1\| GUP1 [Kl... gi\|49643954, gi\|... - gi\|50309615\|ref\|XP_454819.1\| unnamed protein product [Kluyveromyces lactis], gi\|49643954\|emb\|CAG9990...	0.0	[4..609]	[1..587]
gi\|33358356 - gi\|33358356\|gb\|AAQ16649.1\| GUP1-like protein [Candida tropicalis]	0.0	[4..609]	[21..582]
gi\|32422693, gi\|... - gi\|32422693\|ref\|XP_331790.1\| hypothetical protein [Neurospora crassa], gi\|28926794\|gb\|EAA35758.1\| hy... gi\|85116122 - gi\|85116122\|ref\|XP_964994.1\| hypothetical protein NCU02591 [Neurospora crassa OR74A]	3.0E-95	[5..609]	[4..617]
gi\|33302358 - gi\|33302358\|gb\|AAQ01787.1\| Gup1p [Pichia farinosa]	3.0E-87	[88..609]	[1..505]
gi\|63054481 - gi\|63054481\|ref\|NP_592951.2\| membrane bound O-acyltransferase, MBOAT (predicted) [Schizosaccharomyce... SPAC24H6.01c - membrane bound O-acyltransferase, MBOAT	1.0E-83	[10..580]	[1..554]

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Predicted Domain #1

Region A:
Residues: [1-156]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLRIWSCI VHFFSVQALD SRIKPDIEFK RRQRIFINSS KEENGSSSSA VTVTRNPVLS  60
   61 SNSPSPPLWN TWEFRLYYLA FTVVVPFMIK AALATSSESN PNYYKFSGLL AHGWILGRKV 120
  121 DNSDPQYRFF RSNFFLLAIL ILLQIILKKV FVKFSK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [157-609]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPKTKFDFAC GLVFVCFMYG INSVKLFTHA FIFFTLAHSL KRKRLIAAFA IWSYGIFTLF  60
   61 INQKMKNLPF NNIAIILSPM DQWYKGIVPR WDFFFNFTLL RLLSYSMDFL ERWHEQLSRQ 120
  121 PSIDYDDRRP EFRKSLSGST LQTIYESGKN VLEEKERLVA EHHIQDYNFI NFIAYITYAP 180
  181 LFLVGPIITF NDYLYQSENK LPSLTKKNIG FYALKVFSSL LLMEIILHYI YVGAIARTKA 240
  241 WNNDTPLQQA MIALFNLNIM YLKLLIPWRL FRLWAMVDGI DAPENMLRCV DNNYSTVGFW 300
  301 RAWHTSFNKW VIRYIYVPFG GSNNKILTSF AVFSFVAIWH DIQLRVLFWG WLTVLLLLGE 360
  361 TYITNCFSRY RFRSWYRFVC GIGAAINICM MMIINVYGFC LGAEGTKLLL KGIFNNSHSP 420
  421 EFLTAVMVSL FIAVQVMFEI REEEKRHGIN LKC

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [354-609]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENKLPSLTKK NIGFYALKVF SSLLLMEIIL HYIYVGAIAR TKAWNNDTPL QQAMIALFNL  60
   61 NIMYLKLLIP WRLFRLWAMV DGIDAPENML RCVDNNYSTV GFWRAWHTSF NKWVIRYIYV 120
  121 PFGGSNNKIL TSFAVFSFVA IWHDIQLRVL FWGWLTVLLL LGETYITNCF SRYRFRSWYR 180
  181 FVCGIGAAIN ICMMMIINVY GFCLGAEGTK LLLKGIFNNS HSPEFLTAVM VSLFIAVQVM 240
  241 FEIREEEKRH GINLKC

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits