Protein: | MSC2_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 724 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSC2_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..724] | [1..724] |
|
0.0 | [1..719] | [2..690] |
|
2.0E-87 | [20..664] | [1..696] |
|
4.0E-87 | [51..664] | [41..690] |
|
3.0E-78 | [87..696] | [93..725] |
|
3.0E-76 | [98..703] | [8..625] |
|
8.0E-74 | [28..506] | [39..537] |
|
8.0E-74 | [87..696] | [95..729] |
Region A: Residues: [1-282] |
1 11 21 31 41 51 | | | | | | 1 MNLQELLAKV PLLLSYPTII LSSNLIVPSH NDLISRAAST SAAEYADEKL IFFSTDHAIR 60 61 LIFLPTFVAS SFNLFAHYFN FINYSSRRKY YVLFTAIYFL SILTAIFHPI QSTCITLLII 120 121 KLLTTADESS PKIALNFKTI LKTFVPFITL TLVILRWDPS FDASSGDVNK ISTSLAAYAL 180 181 LILTLRYASP LILSTLSSSI GVVSKDTSVA QHSISRNKRF PLILVLPIFS FVLLYLMTIV 240 241 NKTYNIQLLM VFVFFGCLSI FFLSLKDLFT EDGNQKKGGQ ED |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [283-372] |
1 11 21 31 41 51 | | | | | | 1 EYCRMFDIKY MISYLWLTRF TILLTGIMAI VVHFLSFNEI TSSIKTDLLS LLFVVVAEYV 60 61 SSFSNKQPDS HSHNHAHHHS HLTDSLPLEN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.846 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
Region A: Residues: [373-502] |
1 11 21 31 41 51 | | | | | | 1 ESMFKQMALN KDTRSIFSFL LLNTAFMFVQ LLYSFRSKSL GLLSDSLHMA LDCTSLLLGL 60 61 IAGVLTKKPA SDKFPFGLNY LGTLAGFTNG VLLLGIVCGI FVEAIERIFN PIHLHATNEL 120 121 LVVATLGLLV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
transporter activity | 4.27173462293249 | bayes_pls_golite062009 |
Region A: Residues: [503-724] |
1 11 21 31 41 51 | | | | | | 1 NLVGLFAFDH GAHDHGGTDN ENMKGIFLHI LADTLGSVGV VISTLLIKLT HWPIFDPIAS 60 61 LLIGSLILLS ALPLLKSTSA NILLRLDDKK HNLVKSALNQ ISTTPGITGY TTPRFWPTES 120 121 GSSGHSHAHT HSHAENHSHE HHHDQKNGSQ EHPSLVGYIH VQYVDGENST IIKKRVEKIF 180 181 ENVSIKAWVQ VEPQNSTCWC RATSMNTISA NPNSLPLQPI AN |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.