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View Structure Prediction Details

Protein: SIP5_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 489 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIP5_YEAST.

Description E-value Query
Range
Subject
Range
SIP5 - Protein of unknown function; interacts with both the Reg1p/Glc7p phosphatase and the Snf1p kinase
SIP5_YEAST - Protein SIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIP5 PE=1 SV=1
0.0 [1..489] [1..489]
SPBC25B2.03 - zf-C3HC4 type zinc finger
SIP5_SCHPO - Protein sip5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sip5 PE=1 SV=1
0.0 [85..473] [9..367]
gi|8052547 - gi|8052547|gb|AAF71811.1|AC013430_20 F3F9.7 [Arabidopsis thaliana]
2.0E-72 [270..480] [58..263]

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Predicted Domain #1
Region A:
Residues: [1-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVPGKIDQ EDSFNDVRPD SSYNTTSSNS VIKQYDEEAS SRVRTRRTTS LVNNILNGNN  60
   61 ARTKTGSHLS STSRRKTSRE KELAKEAHAK QLVVRCSETV DGGFLAPFGC YSFEKLDYDA 120
  121 TVVKNLIIKR KLAPFYTPLQ DFDESWTRDE LIKIVDGLPL HDTFDENLEE FEDVPIGNLR 180
  181 KSTFNELIDK SLSKKEQRRM HAKIFRARLY KKRILWQENE NETFLERKLE MKRIGSKSSN 240
  241 VEDNTSSQPR KNYHLPSDDL KYTLYKNGSE CPICFLYFPG PFNYSKCCQQ PICTECFVQI 300
  301 KRADPHFPHD EVDPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [316-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPQTNDSEKD PNLLTSEPAN CPYCATASFS ITYQPPTNRE TGIGGMPADS YVYKDAAISR  60
   61 ADGGQPNISA ITSDTIRPDW EIKLNKERAR LMRRSANATA IHISNRLIDP SHSRRRNTSH 120
  121 SITPIHDEST SASRSPEPTI NELEDQMVRE AIRLSLEDQD NRKKSKNRNT SLRP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.207608
Match: PF00462
Description: Glutaredoxin

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [385-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AITSDTIRPD WEIKLNKERA RLMRRSANAT AIHISNRLID PSHSRRRNTS HSITPIHDES  60
   61 TSASRSPEPT INELEDQMVR EAIRLSLEDQ DNRKKSKNRN TSLRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle