Protein: | STU1_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 1513 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STU1_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1513] | [1..1513] |
|
0.0 | [278..795] | [35..519] |
|
0.0 | [294..792] | [63..554] |
|
1.0E-87 | [297..733] | [288..746] |
Region A: Residues: [1-216] |
1 11 21 31 41 51 | | | | | | 1 MSSFNNETNN NSNTNTHPDD SFPLYTVFKD ESVPIEEKMA LLTRFKGHVK KELVNESSIQ 60 61 AYFAALLFIS GHYAYRSYPR LIFLSHSSLC YLIKRVAMQS PVQFNDTLVE QLLNHLIFEL 120 121 PNEKKFWLAS IKAIEAIYLV NPSKIQAILA NFLRRPSENQ NGDYLNRIKS TLLTIDELIQ 180 181 INEKNNSNHL QLLRFFMLSF TNLLNNNLNE HANDDN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Term | Confidence | Notes |
cytoskeletal protein binding | 2.57708254106901 | bayes_pls_golite062009 |
binding | 2.38363524631144 | bayes_pls_golite062009 |
protein binding | 1.81870125631028 | bayes_pls_golite062009 |
actin binding | 1.74253257307802 | bayes_pls_golite062009 |
Region A: Residues: [217-459] |
1 11 21 31 41 51 | | | | | | 1 NNVIIELIFD IMYKYLKMDD ENSQDLIDGF INDLEVEKFK QKFISLAKSQ DQHGSQEDKS 60 61 TLFDEEYEFQ LLLAEAKLPQ LSNNLSSKDP AMKKNYESLN QLQQDLENLL APFQSVKETE 120 121 QNWKLRQSNI IELDNIISGN IPKDNPEEFV TVIKEVQLIE LISRATSSLR TTLSLTALLF 180 181 LKRLIHILND QLPLSILDQI FVIFKNLLSS TKKISSQTAF HCLITLIIDI NHFHNKLFQL 240 241 SFL |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [460-519] |
1 11 21 31 41 51 | | | | | | 1 LINEKTVTPR FCSAILLRSF LIKFNDSNLS LNNSNTTSPT SKLENNIIYI EEWLKKGISD 60 61 |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.593 | a.4.1 | Homeodomain-like |
View | Download | 0.464 | a.64.1 | Saposin |
View | Download | 0.480 | a.112.1 | Description not found. |
View | Download | 0.417 | g.1.1 | Insulin-like |
View | Download | 0.408 | d.37.1 | CBS-domain |
View | Download | 0.407 | a.4.1 | Homeodomain-like |
View | Download | 0.399 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
View | Download | 0.395 | c.47.1 | Thioredoxin-like |
View | Download | 0.387 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.361 | a.4.1 | Homeodomain-like |
View | Download | 0.354 | a.55.1 | IHF-like DNA-binding proteins |
View | Download | 0.341 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
View | Download | 0.341 | a.4.8 | Ribosomal protein S18 |
View | Download | 0.333 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.329 | a.28.3 | Retrovirus capsid protein C-terminal domain |
View | Download | 0.328 | a.4.1 | Homeodomain-like |
View | Download | 0.325 | d.10.1 | DNA-binding domain |
View | Download | 0.323 | a.60.2 | RuvA domain 2-like |
View | Download | 0.322 | d.186.1 | Head-to-tail joining protein W, gpW |
View | Download | 0.321 | a.159.2 | FF domain |
View | Download | 0.321 | a.4.1 | Homeodomain-like |
View | Download | 0.319 | d.58.17 | Metal-binding domain |
View | Download | 0.319 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
View | Download | 0.306 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
View | Download | 0.303 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
View | Download | 0.299 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.296 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
View | Download | 0.294 | a.77.1 | DEATH domain |
View | Download | 0.274 | d.58.24 | CheY-binding domain of CheA |
View | Download | 0.265 | d.58.17 | Metal-binding domain |
View | Download | 0.255 | a.56.1 | CO dehydrogenase ISP C-domain like |
View | Download | 0.253 | a.4.11 | RNA polymerase subunit RPB10 |
View | Download | 0.253 | a.140.1 | LEM domain |
View | Download | 0.248 | d.58.17 | Metal-binding domain |
View | Download | 0.229 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.226 | a.74.1 | Cyclin-like |
View | Download | 0.225 | a.140.1 | LEM domain |
View | Download | 0.216 | a.12.1 | Kix domain of CBP (creb binding protein) |
View | Download | 0.214 | a.64.2 | Bacteriocin AS-48 |
View | Download | 0.214 | f.30.1 | Photosystem I reaction center subunit X, PsaK |
View | Download | 0.206 | a.156.1 | S13-like H2TH domain |
View | Download | 0.202 | a.5.2 | UBA-like |
View | Download | 0.201 | a.126.1 | Serum albumin-like |
Region A: Residues: [520-881] |
1 11 21 31 41 51 | | | | | | 1 SQTTVREAMR LTFWYFYKCY PTNAKRLLSS SFSPQLKKAT ELAIPAHLNI NYQVSRVSST 60 61 ASASSATSRL YSHSSNNSSR KTSLLEQKRN YPSYAQPTQS SSTSLLNAPA VTAGGSVIAS 120 121 KLSNKLKTNL RSTSEYSSKE NEKRARHHDS MNSVSNSNTK DNNNVTKRKV SAPPSSTAAT 180 181 KVSENYTNFD DFPSNQIDLT DELSNSYSNP LIKKYMDKND VSMSSSPISL KGSNKLGEYE 240 241 TLYKKFNDAS FPAQIKDALQ YLQKELLLTS QQSSSAPKFE FPMIMKKLRQ IMIKSPNDFK 300 301 PFLSIEKFTN GVPLNYLIEL YSINSFDYAE ILKNRMNPEK PYELTNLIIT IADLFNFLNA 360 361 NN |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [882-1513] |
1 11 21 31 41 51 | | | | | | 1 CPNDFKLYYM KYKTTFFNYN FKLLLEIFRN LNIKHDNTLR SGTNDLMPKI SMILFQIYGK 60 61 EFDYTCYFNL IFEIYKFDNN RFNKLLADFD IVSTKMKICH ELEKKDANFK VEDIISRESS 120 121 VSFTPIDNKK SEGDEESDDA VDENDVKKCM EMTMINPFKN LETDKTLELK NNVGKRTSST 180 181 DSVVIHDDND KDKKLSEMTK IVSVYQLDQP NPAKEEDDID MENSQKSDLN LSEIFQNSGE 240 241 NTERKLKDDN EPTVKFSTDP PKIINEPEKL IGNGNENEKP DLETMSPIKI NGDENMGQKQ 300 301 RITVKRERDV ALTEQDINSK KMKLVNNKKS EKMHLLIMDN FPRDSLTVYE ISHLLMVDSN 360 361 GNTLMDFDVY FNHMSKAINR IKSGSFTMKH INYLIEPLIT CFQNQKMTDW LTNENGFDEL 420 421 LDVAIMLLKS TDDTPSIPSK ISSKSIILVH CLLVWKKFLN TLSENADDDG VSVRMCFEEV 480 481 WEQILLMLNK FSDYGNEIYK LAQEFRDSLM LSHFFKKHSA TRILSMLVTE IQPDTAGVKE 540 541 TFLIETLWKM LQSPTICQQF KKSNISEIIQ TMSYFIMGTD NTSWNFTSAV VLARCLRVLQ 600 601 TTPDYTEQET ERLFDCLPKN VFKMIMFIAS NE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1318-1513] |
1 11 21 31 41 51 | | | | | | 1 IPSKISSKSI ILVHCLLVWK KFLNTLSENA DDDGVSVRMC FEEVWEQILL MLNKFSDYGN 60 61 EIYKLAQEFR DSLMLSHFFK KHSATRILSM LVTEIQPDTA GVKETFLIET LWKMLQSPTI 120 121 CQQFKKSNIS EIIQTMSYFI MGTDNTSWNF TSAVVLARCL RVLQTTPDYT EQETERLFDC 180 181 LPKNVFKMIM FIASNE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.