| Protein: | YH18_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YH18_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..603] | [1..603] |
|
|
0.0 | [229..594] | [143..508] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MDRKRSFEKI VVSVMVGKNV QKFLTFVEDE PDFQGGPIPS KYLIPKKINL MVYTLFQVHT 60
61 LKFNRKDYDT LSLFYLNRGY YNELSFRVLE RCYEIASARP NDSSTMRTFT DFVSGTPIVR 120
121 SLQKSTIRKY GYNLAPYMFL LLHVDELSIF SAYQASLPGE KKVDTERLKR DLC
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [174-280] |
1 11 21 31 41 51
| | | | | |
1 PRKPTEIKYF SQICNDMMNK KDRLGDVLAT AQRIRRRYNK NGSSEPRLKT LDGLTSERWI 60
61 QWLGLESDYH CSFSSTRNAE DVVAGEAASS DHDQKISRVT RKRPREP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.566 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.514 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.508 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.477 | a.1.1 | Globin-like |
| View | Download | 0.421 | d.26.1 | FKBP-like |
| View | Download | 0.380 | a.74.1 | Cyclin-like |
| View | Download | 0.346 | a.24.4 | Hemerythrin |
| View | Download | 0.333 | a.74.1 | Cyclin-like |
| View | Download | 0.293 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.289 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.255 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.255 | a.126.1 | Serum albumin-like |
| View | Download | 0.249 | a.74.1 | Cyclin-like |
| View | Download | 0.244 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.240 | a.24.3 | Cytochromes |
| View | Download | 0.237 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.227 | a.74.1 | Cyclin-like |
| View | Download | 0.223 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.221 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.214 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.212 | a.74.1 | Cyclin-like |
| View | Download | 0.207 | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [281-551] |
1 11 21 31 41 51
| | | | | |
1 KSTNDILVAG RKLFGSSFEF RDLHQLRLCH EIYMADTPSV AVQAPPGYGK TELFHLPLIA 60
61 LASKGDVKYV SFLFVPYTVL LANCMIRLGR RGCLNVAPVR NFIEEGCDGV TDLYVGIYDD 120
121 LASTNFTDRI AAWENIVECT FRTNNVKLGY LIVDEFHNFE TEVYRQSQFG GITNLDFDAF 180
181 EKAIFLSGTA PEAVADAALQ RIGLTGLAKK SMDINELKRS EDLSRGLSSY PTRMFNLIKE 240
241 KSEVPLGHVH KIWKKVESQP EEALKLLLAL F
|
| Detection Method: | |
| Confidence: | 8.337242 |
| Match: | PF00270 |
| Description: | DEAD/DEAH box helicase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.684 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.328 | N/A | N/A | a.118.14 | FliG |
| View | Download | 0.300 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.278 | N/A | N/A | a.3.1 | Cytochrome c |
|
Region A: Residues: [552-603] |
1 11 21 31 41 51
| | | | | |
1 EIEPESKAIV VASTTNEVEE LACSWRKYFR VVWIHGKLGC CRKGVSHKGV CH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.300 | c.47.1 | Thioredoxin-like |
| View | Download | 0.213 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.202 | c.47.1 | Thioredoxin-like |
