Protein: | YJX8_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 338 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJX8_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..338] | [1..338] |
|
2.0E-99 | [4..337] | [8..296] |
|
6.0E-99 | [4..337] | [8..296] |
|
2.0E-94 | [2..333] | [4..307] |
|
2.0E-88 | [3..335] | [2..289] |
|
3.0E-87 | [4..318] | [11..280] |
|
1.0E-85 | [2..325] | [3..277] |
|
2.0E-85 | [3..335] | [5..292] |
|
2.0E-83 | [3..335] | [2..289] |
|
1.0E-78 | [3..331] | [2..274] |
Region A: Residues: [1-213] |
1 11 21 31 41 51 | | | | | | 1 MSIRPATHAG SWYSNRAQEL SQQLHTYLIK STLKGPIHNA RIIICPHAGY RYCGPTMAYS 60 61 YASLDLNRNV KRIFILGPSH HIYFKNQILV SAFSELETPL GNLKVDTDLC KTLIQKEYPE 120 121 NGKKLFKPMD HDTDMAEHSL EMQLPMLVET LKWREISLDT VKVFPMMVSH NSVDVDRCIG 180 181 NILSEYIKDP NNLFIVSSDF CHWGRRFQYT GYV |
Detection Method: | |
Confidence: | 12.21 |
Match: | 1b4uB |
Description: | LigB subunit of an aromatic-ring-opening dioxygenase LigAB |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [214-338] |
1 11 21 31 41 51 | | | | | | 1 GSKEELNDAI QEETEVEMLT ARSKLSHHQV PIWQSIEIMD RYAMKTLSDT PNGERYDAWK 60 61 QYLEITGNTI CGEKPISVIL SALSKIRDAG PSGIKFQWPN YSQSSHVTSI DDSSVSYASG 120 121 YVTIG |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.