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View Structure Prediction Details

Protein: YKE4_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKE4_YEAST.

Description E-value Query
Range
Subject
Range
YKE4_YEAST - Zinc transporter YKE4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKE4 PE=1 SV=1
YKE4 - Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc a...
4.0E-60 [1..346] [1..346]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-49 [46..343] [30..347]
gi|9716481, gi|4... - gi|9716481|gb|AAF97509.1|AF246266_1 iron-regulated transporter 1 [Lycopersicon esculentum], gi|48367...
2.0E-47 [46..343] [31..349]
ZIP8_ARATH - Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1
2.0E-46 [46..343] [34..346]
gi|16549712, gi|... - gi|22749433|ref|NP_689938.1| solute carrier family 39 (zinc transporter), member 12 [Homo sapiens], ...
1.0E-44 [60..332] [361..634]
gi|16304676 - gi|16304676|emb|CAC86382.1| putative Fe(II) transporter [Thlaspi caerulescens]
2.0E-44 [47..343] [36..345]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASHICSYL LSIAPLVVSH GVHHNRDHGH EANHESKQSF LILKQESIFY SLVCFLQNHL  60
   61 FVLGPRYNAI VAILIIQLMP CLFVLFVPGL RKNDRASLTL SLLVSFSLGT LLGDILLHVI 120
  121 PESLSGVTDV TMVGGAIFLG FISFLTLDKT MRILSGTSND DGSIHSHSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHTPQQTAEK KAGFNMSAYL NVISGIAHHI TDGIALATSF YSSTQVGIMT SIAVTFHEIP  60
   61 HELGDFAILL SSGFTFPQAI RAQAVTAFGA VVGTSIGCWM NEIGNNSHKA TSSSANASEL 120
  121 MLPFTAGGLI YIATTSVVPQ ILHSSAPDSK LREFKKWALQ LVFIFVGFAV MALMDEH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.19382
Match: PF02535
Description: ZIP Zinc transporter

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle