YRC Public Data Repository - Protein Structure Prediction

Protein:	PGA14_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGA14_YEAST.

Description	E-value	Query Range	Subject Range
gi\|190409169 - gi\|190409169\|gb\|EDV12434.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] PGA14_YEAST - Hydrophilin YNL190W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL190W PE=1 SV=1 YNL190W - Cell wall protein of unknown function; proposed role as a hydrophilin induced by osmotic stress; con...	4.0E-53	[1..194]	[1..194]
gi\|197739091, gi... - gi\|254363274\|ref\|ZP_04979320.1\| PPE family protein [Mycobacterium tuberculosis str. Haarlem], gi\|197... gi\|15839689, gi\|... - gi\|15839689\|ref\|NP_334726.1\| PPE family protein [Mycobacterium tuberculosis CDC1551], gi\|13879812\|gb...	0.003	[51..168]	[2454..2566]
gi\|4210548 - gi\|4210548\|dbj\|BAA74544.1\| putrescine N-methyltransferase [Nicotiana sylvestris]	0.005	[39..187]	[4..141]

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Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSSVTAIT LATVATVATA KKGEHDFTTT LTLSSDGSLT TTTSTHTTHK YGKFNKTSKS  60
   61 KTPNHTGTHK YGKFNKTSKS KTPNHTGTHK YGKFNKTSKS KTPNHTGTHK YGKFNKTSKS 120
  121 KTPNHTGTHK YGKFNKTSKS KTPNHTGTHK YGKFNKTKHD TTTYGPGEKA RKNNAAPGPS 180
  181 NFNSIKLFGV TAGSAAVAGA LLLL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits