| Protein: | gi|24348890, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 769 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24348890, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
464.0 | [0..2] | [769..6] |
|
|
447.0 | [0..19] | [747..2] |
|
|
445.0 | [0..2] | [769..6] |
|
|
444.0 | [0..2] | [747..10] |
|
|
444.0 | [0..2] | [769..6] |
|
|
436.0 | [0..2] | [747..10] |
|
|
436.0 | [0..3] | [755..43] |
|
|
429.0 | [0..2] | [747..10] |
|
|
429.0 | [0..15] | [755..66] |
|
|
427.0 | [0..2] | [769..6] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MFGFSATLLS AMLWPSLLPI GCLPYLCLGA LILFKKAPSL SGALFAMFWL TGFCLVLSRQ 60
61 DLPLPQQPTQ VRGEIISLVS QNSDWVSFDI VVDKPNLILG PRAKLRLTWQ SEAALRVGQV 120
121 WDFTFMPKSI SSVLNQGGYN EQKQLISQHI VGKGRVIHAT LHAEYFSLRN HLITQLTPKL 180
181 SGLMQGDILL ALILG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [196-347] |
1 11 21 31 41 51
| | | | | |
1 DEQLISPAKW QALRQTGTGH LVSISGLHLS VITAWICASA LFLLTRLAPH PSRRNLVLAL 60
61 MLAGSSALFY SYLAGFAVPT QRALVMILLI MLLSLLRRYS SAWDRLLFAL FVVLLIDPLA 120
121 CLSAGFWLSF SALAIILYTL ESAQVARSID SN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [348-500] |
1 11 21 31 41 51
| | | | | |
1 QTLFATSCVR LRQFWAIQWR LSLILGLVQA IFFGGVSIHS LWMNMLVVPW FSLLVIPLSM 60
61 LAFLVWWLGE LFGQSWMVPF QLADLSLMPF GKLLEVSDEL PGHWHSVSDG MLALCLCVLL 120
121 ALTLWRYMPH RRQYWQWHLM AGLLCVPMAI FVF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [501-769] |
1 11 21 31 41 51
| | | | | |
1 QRIAQVETAQ WTLHLLDVGQ GLAAVVEKDT RALVYDTGAA FGEDFSYSER VIIPFLNTRG 60
61 LADIDFIVIS HGDNDHAGGA QALAKAYPQA NWITDVDHLN GQPCLPQQIE WQQLTLRFIS 120
121 PQTQAGGNNA SCVLRIDDGQ QSLLLSGDIE KETESVLIER VKAGVILKSQ VLIAPHHGSR 180
181 TSSTQAFIDS VAPELVLFPA GLNNRYGFPK DDVIERYQAR QIRHLTTGME GQISVTFEHG 240
241 TLEVKTYRRD FAPFWYNRLF RFGDLINPE
|
| Detection Method: | |
| Confidence: | 12.045757 |
| Match: | 2bibA |
| Description: | Crystal structure of the complete modular teichioic acid phosphorylcholine esterase Pce (CbpE) from Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.590913389028346 | bayes_pls_golite062009 |
| catalytic activity | 0.398796871066338 | bayes_pls_golite062009 |
| protein binding | 0.233736652147815 | bayes_pls_golite062009 |
| RNA binding | 0.165539790635644 | bayes_pls_golite062009 |
| hydrolase activity | 0.0778913972787759 | bayes_pls_golite062009 |
