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View Structure Prediction Details

Protein: gi|29140913, gi|...
Organism: Salmonella enterica subsp. enterica serovar Typhi str. Ty2
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29140913, gi|....

Description E-value Query
Range
Subject
Range
gi|227835850, gi... - gi|227887500|ref|ZP_04005305.1| transaldolase [Escherichia coli 83972], gi|227835850|gb|EEJ46316.1| ...
gi|238901627, gi... - gi|238901627|ref|YP_002927423.1| transaldolase A [Escherichia coli BW2952], gi|238863674|gb|ACR65672...
EG11797 - transaldolase A / Transaldolase A; creBC regulon
gi|251785790, gi... - gi|251785790|ref|YP_003000094.1| hypothetical protein B21_02317 [Escherichia coli BL21], gi|24237806...
gi|253772645, gi... - gi|254289199|ref|YP_003054947.1| transaldolase A [Escherichia coli BL21(DE3)], gi|253978506|gb|ACT44...
gi|254162438, gi... - gi|254162438|ref|YP_003045546.1| transaldolase A [Escherichia coli B str. REL606], gi|253974339|gb|A...
gi|254593808, gi... - gi|254794408|ref|YP_003079245.1| transaldolase A [Escherichia coli O157:H7 str. TW14359], gi|2545938...
TALA_ECO57 - Transaldolase A OS=Escherichia coli O157:H7 GN=talA PE=3 SV=1
TALA_ECOL6 - Transaldolase A OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=talA PE=3 SV=1
TALA_ECOLI - Transaldolase A (EC 2.2.1.2) - Escherichia coli
gi|15802986, gi|... - gi|15802986|ref|NP_289016.1| transaldolase A [Escherichia coli O157:H7 EDL933], gi|12516839|gb|AAG57...
EG11797 - transaldolase A / Transaldolase A; creBC regulon
gi|75515800, gi|... - gi|75515800|ref|ZP_00737935.1| COG0176: Transaldolase [Escherichia coli 53638], gi|188494053|ref|ZP_...
gi|75211425, gi|... - gi|75211425|ref|ZP_00711515.1| COG0176: Transaldolase [Escherichia coli B171], gi|194427358|ref|ZP_0...
gi|168773632, gi... - gi|187770620|gb|EDU34464.1| transaldolase [Escherichia coli O157:H7 str. EC4196], gi|168773632|ref|Z...
gi|157161923, gi... - gi|75196469|ref|ZP_00706539.1| COG0176: Transaldolase [Escherichia coli HS], gi|157161923|ref|YP_001...
gi|189003377, gi... - gi|189003377|gb|EDU72363.1| transaldolase [Escherichia coli O157:H7 str. EC4076], gi|168778421|ref|Z...
gi|75187208, gi|... - gi|75187208|ref|ZP_00700475.1| COG0176: Transaldolase [Escherichia coli E24377A], gi|157155721|ref|Y...
gi|189372373, gi... - gi|189372373|gb|EDU90789.1| transaldolase [Escherichia coli O157:H7 str. EC869], gi|168787801|ref|ZP...
gi|83586888, gi|... - gi|83586888|ref|ZP_00925519.1| COG0176: Transaldolase [Escherichia coli 101-1], gi|194437684|ref|ZP_...
gi|189378580, gi... - gi|189378580|gb|EDU96996.1| transaldolase [Escherichia coli O157:H7 str. EC508], gi|168798826|ref|ZP...
gi|192927612, gi... - gi|75257267|ref|ZP_00728791.1| COG0176: Transaldolase [Escherichia coli E22], gi|193064729|ref|ZP_03...
gi|170019252, gi... - gi|170019252|ref|YP_001724206.1| transaldolase A [Escherichia coli ATCC 8739], gi|169754180|gb|ACA76...
gi|75240113, gi|... - gi|75240113|ref|ZP_00724072.1| COG0176: Transaldolase [Escherichia coli F11], gi|191172956|ref|ZP_03...
gi|170082073, gi... - gi|170082073|ref|YP_001731393.1| transaldolase A [Escherichia coli str. K-12 substr. DH10B], gi|1698...
gi|193068394, gi... - gi|75237793|ref|ZP_00721809.1| COG0176: Transaldolase [Escherichia coli E110019], gi|193068394|ref|Z...
gi|170521090, gi... - gi|170683372|ref|YP_001744646.1| transaldolase [Escherichia coli SMS-3-5], gi|170521090|gb|ACB19268....
gi|75229214, gi|... - gi|75229214|ref|ZP_00715782.1| COG0176: Transaldolase [Escherichia coli B7A], gi|191167654|ref|ZP_03...
gi|195936605 - gi|195936605|ref|ZP_03081987.1| transaldolase A [Escherichia coli O157:H7 str. EC4024]
gi|1799888, gi|2... - gi|89109269|ref|AP_003049.1| transaldolase A [Escherichia coli str. K-12 substr. W3110], gi|2337774|...
gi|15832580, gi|... - gi|15832580|ref|NP_311353.1| transaldolase A [Escherichia coli O157:H7 str. Sakai], gi|13362796|dbj|...
gi|168748487, gi... - gi|188017008|gb|EDU55130.1| transaldolase [Escherichia coli O157:H7 str. EC4113], gi|168748487|ref|Z...
gi|189356652, gi... - gi|189356652|gb|EDU75071.1| transaldolase [Escherichia coli O157:H7 str. EC4401], gi|168756227|ref|Z...
gi|189368443, gi... - gi|189368443|gb|EDU86859.1| transaldolase [Escherichia coli O157:H7 str. EC4501], gi|168761064|ref|Z...
gi|168768547, gi... - gi|189362307|gb|EDU80726.1| transaldolase [Escherichia coli O157:H7 str. EC4486], gi|168768547|ref|Z...
gi|218705962, gi... - gi|218705962|ref|YP_002413481.1| transaldolase A [Escherichia coli UMN026], gi|218433059|emb|CAR1395...
gi|110344228, gi... - gi|110642636|ref|YP_670366.1| transaldolase A [Escherichia coli 536], gi|110344228|gb|ABG70465.1| tr...
gi|124499636, gi... - gi|124529776|ref|ZP_01700653.1| transaldolase [Escherichia coli B], gi|124499636|gb|EAY47121.1| tran...
TALA_ECOL6 - Transaldolase A OS=Escherichia coli O6 GN=talA PE=3 SV=1
gi|208727907, gi... - gi|208808106|ref|ZP_03250443.1| transaldolase [Escherichia coli O157:H7 str. EC4206], gi|208727907|g...
gi|208812406, gi... - gi|208812406|ref|ZP_03253735.1| transaldolase [Escherichia coli O157:H7 str. EC4045], gi|208733683|g...
gi|208741170, gi... - gi|208821047|ref|ZP_03261367.1| transaldolase [Escherichia coli O157:H7 str. EC4042], gi|208741170|g...
gi|209160596, gi... - gi|209399196|ref|YP_002271932.1| transaldolase [Escherichia coli O157:H7 str. EC4115], gi|209160596|...
gi|209913195, gi... - gi|209919936|ref|YP_002294020.1| transaldolase A [Escherichia coli SE11], gi|209913195|dbj|BAG78269....
gi|217327002, gi... - gi|217327002|ref|ZP_03443085.1| transaldolase [Escherichia coli O157:H7 str. TW14588], gi|217319369|...
gi|218554987, gi... - gi|218554987|ref|YP_002387900.1| transaldolase A [Escherichia coli IAI1], gi|218361755|emb|CAQ99352....
gi|218352822, gi... - gi|218696090|ref|YP_002403757.1| transaldolase A [Escherichia coli 55989], gi|218352822|emb|CAU98610...
0.0 [1..316] [1..316]
gi|91211793, gi|... - gi|91211793|ref|YP_541779.1| transaldolase A [Escherichia coli UTI89], gi|91073367|gb|ABE08248.1| tr...
gi|117624660, gi... - gi|117624660|ref|YP_853573.1| transaldolase A [Escherichia coli APEC O1], gi|115513784|gb|ABJ01859.1...
gi|218366168, gi... - gi|218559399|ref|YP_002392312.1| transaldolase A [Escherichia coli S88], gi|218366168|emb|CAR03914.1...
0.0 [1..316] [1..316]
gi|187733490, gi... - gi|75178057|ref|ZP_00698116.1| COG0176: Transaldolase [Shigella boydii BS512], gi|187733490|ref|YP_0...
0.0 [1..316] [1..316]
gi|197261873, gi... - gi|197261873|ref|ZP_03161947.1| transaldolase [Salmonella enterica subsp. enterica serovar Saintpaul...
gi|205329850, gi... - gi|205329850|gb|EDZ16614.1| transaldolase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- ...
lcl|NC_016856.1_... - [gene=talA] [protein=transaldolase A] [protein_id=YP_005238561.1] [location=2634082..2635032]
TALA_SALTY - Transaldolase A OS=Salmonella typhimurium GN=talA PE=3 SV=1
gi|197936736, gi... - gi|198242220|ref|YP_002216540.1| transaldolase [Salmonella enterica subsp. enterica serovar Dublin s...
TALA_SALTY - Transaldolase A OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=talA PE=3 SV=1
TALA_SALTY - Transaldolase A OS=Salmonella typhimurium GN=talA PE=3 SV=1
0.0 [1..316] [1..316]
TAL2_SHISS - Transaldolase 2 OS=Shigella sonnei (strain Ss046) GN=tal2 PE=3 SV=1
0.0 [1..316] [1..316]
TALA_SALTI - Transaldolase A OS=Salmonella typhi GN=talA PE=3 SV=1
gi|213999284 - gi|213999284|ref|ZP_03410019.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi s...
gi|213852705 - gi|213852705|ref|ZP_03382237.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi s...
gi|213646064 - gi|213646064|ref|ZP_03376117.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi s...
gi|213581206 - gi|213581206|ref|ZP_03363032.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi s...
gi|224582995, gi... - gi|224582995|ref|YP_002636793.1| transaldolase [Salmonella enterica subsp. enterica serovar Paratyph...
gi|16761390 - gi|16761390|ref|NP_457007.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi str....
gi|205349517, gi... - gi|205349517|gb|EDZ36148.1| transaldolase [Salmonella enterica subsp. enterica serovar Hadar str. RI...
gi|167549514, gi... - gi|205325160|gb|EDZ12999.1| transaldolase [Salmonella enterica subsp. enterica serovar Saintpaul str...
TALA_SALTI - Transaldolase A OS=Salmonella typhi GN=talA PE=3 SV=1
TAL2_SALCH - Transaldolase 2 OS=Salmonella choleraesuis (strain SC-B67) GN=tal2 PE=3 SV=1
gi|213428323 - gi|213428323|ref|ZP_03361073.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi s...
gi|213051484 - gi|213051484|ref|ZP_03344362.1| transaldolase A [Salmonella enterica subsp. enterica serovar Typhi s...
TAL2_SALCH - Transaldolase 2 OS=Salmonella choleraesuis GN=tal2 PE=3 SV=1
TAL2_SALCH - Transaldolase 2 OS=Salmonella choleraesuis GN=tal2 PE=3 SV=1
gi|194404904, gi... - gi|194446241|ref|YP_002041732.1| transaldolase [Salmonella enterica subsp. enterica serovar Newport ...
gi|205344855, gi... - gi|205344855|gb|EDZ31619.1| transaldolase [Salmonella enterica subsp. enterica serovar Weltevreden s...
0.0 [1..316] [1..316]
TAL2_SALPA - Transaldolase 2 OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=tal2 PE=3 SV=1
gi|197093055, gi... - gi|197361579|ref|YP_002141215.1| transaldolase A [Salmonella enterica subsp. enterica serovar Paraty...
TAL2_SALPA - Transaldolase 2 OS=Salmonella paratyphi A GN=tal2 PE=3 SV=1
0.0 [1..316] [1..316]
gi|30042099, gi|... - gi|30063844|ref|NP_838015.1| transaldolase A [Shigella flexneri 2a str. 2457T], gi|30042099|gb|AAP17...
gi|110806397, gi... - gi|110806397|ref|YP_689917.1| transaldolase A [Shigella flexneri 5 str. 8401], gi|110615945|gb|ABF04...
0.0 [1..316] [1..316]
gi|24113793, gi|... - gi|24113793|ref|NP_708303.1| transaldolase A [Shigella flexneri 2a str. 301], gi|24052875|gb|AAN4401...
TALA_SHIFL - Transaldolase A OS=Shigella flexneri GN=talA PE=3 SV=1
0.0 [1..316] [1..316]
TALB_PASMU - Transaldolase B OS=Pasteurella multocida GN=talB PE=3 SV=1
TALB_PASMU - Transaldolase B OS=Pasteurella multocida (strain Pm70) GN=talB PE=3 SV=1
0.0 [1..316] [1..316]

Back

Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQLDGIKQF TTVVADSGDI ESIRHYQPQD ATTNPSLLLK AAGLEQYGHL IEDAIAWGKK  60
   61 HGGTQEQQVA AASDKLAVNF GAEILKSIPG RVSTEVDVRL SFDKEKSIEK ARHLVDLYQQ 120
  121 QDVDKSRILI KLAATWEGIR AAEQLEKEGI NCNLTLLFSF AQARACAEAG VYLISPFVGR 180
  181 IYDWYQARSP LEPYVVEEDP GVKSVRNIYD YFKQHRYETI VMGASFRRTE QILALTGCDR 240
  241 LTISPNLLKE LKEKEEPVIR KLVPSSQMFH RPTPMTEAEF RWEHNQDAMA VEKLSEGIRL 300
  301 FAVDQRKLED LLAAKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 121.0
Match: 1ucwA
Description: Transaldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring aldehyde or ketonic groups 3.28746773527289 bayes_pls_golite062009
transaldolase activity 2.77878684721788 bayes_pls_golite062009
catalytic activity 2.67031204377352 bayes_pls_golite062009
fructose-bisphosphate aldolase activity 2.03916133349076 bayes_pls_golite062009
fructose binding 1.42916270771409 bayes_pls_golite062009
porphobilinogen synthase activity 0.658378297259497 bayes_pls_golite062009
binding 0.467753048702448 bayes_pls_golite062009
transferase activity 0.464721888799972 bayes_pls_golite062009
aldehyde-lyase activity 0.351872954170322 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle