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View Structure Prediction Details

Protein: HGNC:12827|MIM:6...
Organism: SPECIES UNKNOWN
Length: 696 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:12827|MIM:6....

Description E-value Query
Range
Subject
Range
gi|4176766 - gi|4176766|gb|AAD08928.1| xenotropic and polytropic murine retrovirus receptor [Homo sapiens]
903.0 [0..1] [696..1]
gi|73960411 - gi|73960411|ref|XP_547421.2| PREDICTED: similar to xenotropic and polytropic retrovirus receptor iso...
900.0 [0..1] [696..1]
gi|109019166 - gi|109019166|ref|XP_001115004.1| PREDICTED: similar to xenotropic and polytropic retrovirus receptor...
892.0 [0..1] [696..1]
gi|149058352, gi... - gi|62659537|ref|XP_223117.3| PREDICTED: similar to xenotropic and polytropic retrovirus receptor 1 [...
892.0 [0..1] [696..1]
XPR1_MUSTR - Xenotropic and polytropic retrovirus receptor 1 OS=Mus terricolor GN=Xpr1 PE=1 SV=1
XPR1_MUSDU - Xenotropic and polytropic retrovirus receptor 1 OS=Mus dunni GN=Xpr1 PE=1 SV=1
889.0 [0..1] [696..1]
gi|6093316 - gi|6093316|gb|AAF03486.1|AF131100_1 xenotropic and polytropic murine leukemia virus receptor [Mustel...
XPR1_NEOVI - Xenotropic and polytropic retrovirus receptor 1 OS=Neovison vison GN=XPR1 PE=2 SV=1
888.0 [0..1] [696..1]
XPR1_CRIGR - Xenotropic and polytropic retrovirus receptor 1 homolog OS=Cricetulus griseus GN=XPR1 PE=2 SV=1
886.0 [0..1] [696..1]
XPR1_MUSSP - Xenotropic and polytropic retrovirus receptor 1 OS=Mus spretus GN=Xpr1 PE=1 SV=1
881.0 [0..1] [696..1]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEHLSAH ITPEWRKQYI QYEAFKDMLY SAQDQAPSVE VTDEDTVKRY FAKFEEKFFQ  60
   61 TCEKELAKIN TFYSEKLAEA QRRFATLQNE LQSSLDAQKE STGVTTLRQR RKPVFHLSHE 120
  121 ERVQHRNIKD LKLAFSEFYL SLILLQNYQN LNFTGFRKIL KKHDKILETS RGADWRVAHV 180
  181 EVAPFYTCKK INQLISE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 73.468521
Match: PF03105.10
Description: No description for PF03105.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEAVVTNELE DGDRQKAMKR LRVPPLGAAQ PAPAWTTFRV GLFCGIFIVL NITLVLAAVF  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [258-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLETDRSIWP LIRIYRGGFL LIEFLFLLGI NTYGWRQAGV NHVLIFELNP RSNLSHQHLF  60
   61 EIAGFLGILW CLSLLACFFA PISVIPTYVY PLALYGFMVF FLINPTKTFY YKSRFWLLKL 120
  121 LFRVFTAPFH KVGFADFWLA DQLNSLSVIL MDLEYMICFY SLELKWDESK GLLPNNSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [436-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESGICHKYTY GVRAIVQCIP AWLRFIQCLR RYRDTKRAFP HLVNAGKYST TFFMVTFAAL  60
   61 YSTHKERGHS DTMVFFYLWI VFYIISSCYT LIWDLKMDWG LFDKNAGENT FLREEIVYPQ 120
  121 KAYYYCAIIE DVILRFAWTI QISITSTTLL PHSGDIIATV FAPLEVFRRF VWNFFRLENE 180
  181 HLN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 102.283997
Match: PF03124.5
Description: No description for PF03124.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [619-696]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NCGEFRAVRD ISVAPLNADD QTLLEQMMDQ DDGVRNRQKN RSWKYNQSIS LRRPRLASQS  60
   61 KARDTKVLIE DTDDEANT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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