YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: HGNC:7690|MIM:60...
Organism: SPECIES UNKNOWN
Length: 128 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:7690|MIM:60....

Description E-value Query
Range
Subject
Range
gi|56202717, gi|... - gi|56202717|emb|CAI19953.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa [Homo sapie...
gi|109451994, gi... - gi|109451994|emb|CAK54859.1| NDUFA6 [synthetic construct], gi|109451398|emb|CAK54560.1| NDUFA6 [synt...
ENSPTRT00000026990 - null
210.0 [0..1] [128..27]
NDUA6_BOVIN - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus GN=NDUFA6 PE=1 SV=2
206.0 [0..1] [128..1]
NDUA6_PONAB - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pongo abelii GN=NDUFA6 PE=2 SV=3
NDUA6_PONPY - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pongo pygmaeus GN=NDUFA6 PE=2 SV=3
205.0 [0..1] [128..1]
gi|109094394 - gi|109094394|ref|XP_001106675.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subco...
205.0 [0..1] [128..27]
gi|149065780, gi... - gi|27663138|ref|XP_235518.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomple...
204.0 [0..2] [128..4]
gi|60833616 - gi|60833616|gb|AAX37056.1| NADH dehydrogenase 1 alpha subcomplex 6 [synthetic construct]
204.0 [0..1] [128..1]

Back

Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSGVRQAT STASTFVKPI FSRDMNEAKR RVRELYRAWY REVPNTVHQF QLDITVKMGR  60
   61 DKVREMFMKN AHVTDPRVVD LLVIKGKIEL EETIKVWKQR THVMRFFHET EAPRPKDFLS 120
  121 KFYVGHDP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.79588
Match: PF05347.6
Description: No description for PF05347.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.815 N/A N/A a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle