YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29541504, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	169 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29541504, gi|....

Description	E-value	Query Range	Subject Range
gi\|164601202, gi... - gi\|164685696\|ref\|ZP_01946294.2\| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177'], ... gi\|165918865, gi... - gi\|165918865\|ref\|ZP_02218951.1\| conserved hypothetical protein [Coxiella burnetii RSA 334], gi\|16591... gi\|154707500, gi... - gi\|94491978\|ref\|ZP_01299187.1\| hypothetical protein CburD_01000866 [Coxiella burnetii Dugway 7E9-12]...	296.0	[0..4]	[169..1]
gi\|161763409, gi... - gi\|95926327\|ref\|ZP_01309123.1\| hypothetical protein CburR_01001861 [Coxiella burnetii RSA 331], gi\|1... gi\|154356363, gi... - gi\|94491909\|ref\|ZP_01299118.1\| hypothetical protein CburD_01000796 [Coxiella burnetii Dugway 7E9-12]... gi\|29654444, gi\|... - gi\|29654444\|ref\|NP_820136.1\| enhanced entry protein [Coxiella burnetii RSA 493], gi\|29541711\|gb\|AAO9... gi\|212212462, gi... - gi\|212212462\|ref\|YP_002303398.1\| enhanced entry protein [Coxiella burnetii CbuG_Q212], gi\|212010872\|...	230.0	[0..33]	[167..29]
gi\|95927622 - gi\|95927622\|ref\|ZP_01310377.1\| hypothetical protein CburR_01000567 [Coxiella burnetii RSA 331]	225.0	[0..40]	[169..1]
gi\|53752414, gi\|... - gi\|54298629\|ref\|YP_124998.1\| enhanced entry protein EnhB [Legionella pneumophila str. Paris], gi\|537...	198.0	[0..26]	[166..40]
gi\|52629957, gi\|... - gi\|52842846\|ref\|YP_096645.1\| enhanced entry protein EnhB [Legionella pneumophila subsp. pneumophila ...	197.0	[0..26]	[166..40]
gi\|53755311, gi\|... - gi\|54295479\|ref\|YP_127894.1\| enhanced entry protein EnhB [Legionella pneumophila str. Lens], gi\|5375...	182.0	[0..27]	[166..41]
gi\|5305320 - gi\|5305320\|gb\|AAD41586.1\|AF057704_2 EnhB [Legionella pneumophila]	155.0	[0..26]	[117..40]

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Predicted Domain #1

Region A:
Residues: [1-169]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFMRVYYLK ILFFCLISTW ISPSIAAKTG EQHFPSGCRM VGYEFKNNLL LLKPDSETEE  60
   61 VSTLYLIHNI SPDAISFAVE KLPTQSFSPS YKNTINPNHW AAFALNQPFL QLKCHANGIS 120
  121 VNCENVINLC QYNRAKFAEH NQGTYWILKN GTRYQAIRGA IDNGILLRW

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits