YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29654444, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	184 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654444, gi|....

Description	E-value	Query Range	Subject Range
gi\|164601202, gi... - gi\|164685696\|ref\|ZP_01946294.2\| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177'], ... gi\|165918865, gi... - gi\|165918865\|ref\|ZP_02218951.1\| conserved hypothetical protein [Coxiella burnetii RSA 334], gi\|16591... gi\|154707500, gi... - gi\|94491978\|ref\|ZP_01299187.1\| hypothetical protein CburD_01000866 [Coxiella burnetii Dugway 7E9-12]...	225.0	[0..30]	[169..31]
gi\|29541504, gi\|... - gi\|29654238\|ref\|NP_819930.1\| enhanced entry protein [Coxiella burnetii RSA 493], gi\|29541504\|gb\|AAO9...	225.0	[0..30]	[169..34]
gi\|95927622 - gi\|95927622\|ref\|ZP_01310377.1\| hypothetical protein CburR_01000567 [Coxiella burnetii RSA 331]	209.0	[0..36]	[169..1]
gi\|53752414, gi\|... - gi\|54298629\|ref\|YP_124998.1\| enhanced entry protein EnhB [Legionella pneumophila str. Paris], gi\|537...	200.0	[0..29]	[168..47]
gi\|52629957, gi\|... - gi\|52842846\|ref\|YP_096645.1\| enhanced entry protein EnhB [Legionella pneumophila subsp. pneumophila ...	200.0	[0..29]	[168..47]
gi\|53755311, gi\|... - gi\|54295479\|ref\|YP_127894.1\| enhanced entry protein EnhB [Legionella pneumophila str. Lens], gi\|5375...	189.0	[0..29]	[168..47]
gi\|5305320 - gi\|5305320\|gb\|AAD41586.1\|AF057704_2 EnhB [Legionella pneumophila]	156.0	[0..29]	[117..47]

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Predicted Domain #1

Region A:
Residues: [1-184]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGCKKFLV LLGAALYFLI PGAEGKILRY PYGCYPMGYK FNYYNLILQP TGRYHPQTIY  60
   61 FIHNVSKQAI SLFQARSNDE PYIIHINTTI APNAWSVLAT DEKKVKYICT NGGNDILKLK 120
  121 IINCSKVLDI CEFPRTRFGD NNRGNYWAVE NIGSSTAAVS AIRWYGILLI DPKKRDLENE 180
  181 GSLL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits