YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30248846, gi|...
Organism: Nitrosomonas europaea ATCC 19718
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30248846, gi|....

Description E-value Query
Range
Subject
Range
gi|21239245 - gi|21239245|gb|AAM44223.1|AF461013_2 MerT [Klebsiella pneumoniae]
gi|2117131 - gi|2117131|emb|CAA70239.1| mercuric ion transport protein [Escherichia coli]
172.0 [0..2] [116..22]

Back

Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQNGRGA LFAGGLAAIL ASTCCLGPLV LVALGFSGAW IGNLTILEPY RPIFIGAALV  60
   61 ALFFAWRRIY RPAEACKPGE VCAIPHVHTT YKLIFWIVAV LVLVALGFPY VMPFFY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 86.920819
Match: PF02411.6
Description: No description for PF02411.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.863 0.010 mercury ion transmembrane transporter activity a.24.1 Apolipoprotein


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle