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View Structure Prediction Details

Protein: GMHA_WOLSU
Organism: Wolinella succinogenes
Length: 189 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GMHA_WOLSU.

Description E-value Query
Range
Subject
Range
GMHA_HELPJ - Phosphoheptose isomerase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=gmhA PE=3 SV=1
gi|7437308 - pir||B71887 phosphoheptose isomerase - Helicobacter pylori (strain J99)
167.0 [0..3] [186..4]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDFIQKELE AHILTTQETM KRLAPLVEEV ASLMVDCLKS GHKILLFGNG GSAADAQHIA  60
   61 AELTGRYKKE RRGLPAIALT TDTSALTAIG NDYGYDRVFS RQVEALAHKG DLLVGISTSG 120
  121 NSPNVLLALE EGRRIGCVCV GLSGREGGRM NELCDINLVI PSHDTPRIQE MHITLAHILC 180
  181 HLVEERAIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1tk9A
Description: Crystal Structure of Phosphoheptose isomerase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
D-sedoheptulose 7-phosphate isomerase activity 4.14215058629352 bayes_pls_golite062009
catalytic activity 1.5278037255884 bayes_pls_golite062009
glucose-6-phosphate isomerase activity 1.27102475335512 bayes_pls_golite062009
glutamine-fructose-6-phosphate transaminase (isomerizing) activity 1.11549102314657 bayes_pls_golite062009
isomerase activity 0.875614547872629 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 0.718035369881213 bayes_pls_golite062009
intramolecular oxidoreductase activity 0.543772038478781 bayes_pls_golite062009
binding 0.239170972934454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle