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View Structure Prediction Details

Protein: gi|34558104
Organism: Wolinella succinogenes DSM 1740
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34558104.

Description E-value Query
Range
Subject
Range
gi|7443088 - pir||C70372 flagellar hook basal body protein flgG - Aquifex aeolicus
gi|15606190, gi|... - gi|2983377|gb|AAC06963.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5], gi|15606190...
270.0 [0..1] [262..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRALYTATT GMMGQQLQID VTSNNIANVN TIGYKKQRAE FADLFYQVME YAGSSTSETT  60
   61 LSPTGIEVGL GVRPTAITKI FSQGNFKETG NNLDIAIT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNGFFQIQLP DGTTAYTRNG AFKPDDEGNI VNSDGYRLIP EITIPEDATQ INIGVDGTVS  60
   61 VLQGNQTEVN TIGQIEIATF INPAGLHSLG DNLYLNTNAS GDPIVDTPGL NGFGQLRQGF 120
  121 VELSNVKLVE EMTDLITGQR AYEANSKSIQ TADSMLQTVN SLKRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.30103
Match: 1wlgA
Description: Crystal structure of FlgE31, a major fragment of the hook protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle