YRC Public Data Repository - Protein Structure Prediction

Protein:	TUSD_VIBVY
Organism:	Vibrio vulnificus YJ016
Length:	131 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TUSD_VIBVY.

Description	E-value	Query Range	Subject Range
TUSD_VIBVU - Sulfurtransferase TusD homolog OS=Vibrio vulnificus (strain CMCP6) GN=tusD PE=3 SV=1 YD33_VIBVU, TUSD... - (Q8DCR3) Hypothetical UPF0163 protein VV11333, (Q8DCR3) UPF0163 protein VV11333, Sulfurtransferase T...	184.0	[0..1]	[131..1]
gi\|77957341 - gi\|77957341\|ref\|ZP_00821400.1\| COG1553: Uncharacterized conserved protein involved in intracellular ...	182.0	[0..1]	[131..1]
TUSD_VIBPA - Sulfurtransferase TusD homolog OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=tu... gi\|153840121, gi... - gi\|153840121\|ref\|ZP_01992788.1\| sulfur relay protein TusB/DsrE [Vibrio parahaemolyticus AQ3810], gi\|... YR76_VIBPA, TUSD... - (Q87L40) Hypothetical UPF0163 protein VP2776, (Q87L40) UPF0163 protein VP2776, Sulfurtransferase Tus...	179.0	[0..1]	[131..1]
gi\|29144319, gi\|... - gi\|29144319\|ref\|NP_807661.1\| hypothetical protein t4054 [Salmonella enterica subsp. enterica serovar... gi\|16762832 - gi\|16762832\|ref\|NP_458449.1\| hypothetical protein STY4347 [Salmonella enterica subsp. enterica serov... gi\|213608033 - gi\|213608033\|ref\|ZP_03368859.1\| hypothetical protein SentesTyp_00227 [Salmonella enterica subsp. ent... gi\|213649027 - gi\|213649027\|ref\|ZP_03379080.1\| hypothetical protein SentesTy_18148 [Salmonella enterica subsp. ente... TUSD_SALTI, YHEN... - (Q8Z1Y3) UPF0163 protein yheN, Sulfurtransferase tusD OS=Salmonella typhi GN=tusD PE=3 SV=1 gi\|213865463 - gi\|213865463\|ref\|ZP_03387582.1\| hypothetical protein SentesT_37282 [Salmonella enterica subsp. enter... gi\|214000190 - gi\|214000190\|ref\|ZP_03410925.1\| hypothetical protein Salmonellentericaenterica_05831 [Salmonella ent... gi\|213163702 - gi\|213163702\|ref\|ZP_03349412.1\| hypothetical protein Salmoneentericaenterica_28293 [Salmonella enter... gi\|213426775 - gi\|213426775\|ref\|ZP_03359525.1\| hypothetical protein SentesTyphi_14915 [Salmonella enterica subsp. e... gi\|213586429 - gi\|213586429\|ref\|ZP_03368255.1\| hypothetical protein SentesTyph_36207 [Salmonella enterica subsp. en... TUSD_SALTI - Sulfurtransferase TusD OS=Salmonella typhi GN=tusD PE=3 SV=1	179.0	[0..4]	[131..1]
Y426_PHOLL, TUSD... - (Q7N9B7) UPF0163 protein plu0426, Sulfurtransferase tusD OS=Photorhabdus luminescens subsp. laumondi... TUSD_PHOLL - Sulfurtransferase TusD OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 /...	178.0	[0..1]	[131..1]
TUSD_SHIF8 - Sulfurtransferase TusD OS=Shigella flexneri serotype 5b (strain 8401) GN=tusD PE=3 SV=1 gi\|24114609, gi\|... - gi\|24114609\|ref\|NP_709119.1\| hypothetical protein SF3363 [Shigella flexneri 2a str. 301], gi\|2405380... TUSD_SHIFL - Sulfurtransferase TusD OS=Shigella flexneri GN=tusD PE=3 SV=1 gi\|30043631, gi\|... - gi\|30065369\|ref\|NP_839540.1\| hypothetical protein S4399 [Shigella flexneri 2a str. 2457T], gi\|300436...	178.0	[0..4]	[131..1]
gi\|195632239, gi... - gi\|195632239\|gb\|EDX50723.1\| sulfurtransferase TusD [Salmonella enterica subsp. enterica serovar Newp... TUSD_SALHS - Sulfurtransferase TusD OS=Salmonella heidelberg (strain SL476) GN=tusD PE=3 SV=1 TUSD_SALSV - Sulfurtransferase TusD OS=Salmonella schwarzengrund (strain CVM19633) GN=tusD PE=3 SV=1 TUSD_SALA4 - Sulfurtransferase TusD OS=Salmonella agona (strain SL483) GN=tusD PE=3 SV=1 gi\|205327611, gi... - gi\|205327611\|gb\|EDZ14375.1\| sulfurtransferase TusD [Salmonella enterica subsp. enterica serovar 4,[5... gi\|168235037, gi... - gi\|197291514\|gb\|EDY30866.1\| sulfurtransferase TusD [Salmonella enterica subsp. enterica serovar Schw... gi\|205338762, gi... - gi\|205338762\|gb\|EDZ25526.1\| sulfurtransferase TusD [Salmonella enterica subsp. enterica serovar Heid... TUSD_SALPA - Sulfurtransferase TusD OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=tusD PE=3 SV=1 TUSD_SALPB - Sulfurtransferase TusD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=tusD PE=3 SV=1 TUSD_SALCH - Sulfurtransferase TusD OS=Salmonella choleraesuis GN=tusD PE=3 SV=1 TUSD_SALTY - Sulfurtransferase TusD OS=Salmonella typhimurium GN=tusD PE=3 SV=1 TUSD_SALTY, YHEN... - (Q8ZLL7) UPF0163 protein yheN, Sulfurtransferase tusD OS=Salmonella typhimurium GN=tusD PE=3 SV=1 lcl\|NC_016856.1_... - [gene=yheN] [protein=hypothetical protein] [protein_id=YP_005239642.1] [location=complement(3617344.... TUSD_SALTY - Sulfurtransferase TusD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=tusD PE=3 ... TUSD_SALCH - Sulfurtransferase TusD OS=Salmonella choleraesuis (strain SC-B67) GN=tusD PE=3 SV=1 TUSD_SALPB - Sulfurtransferase tusD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=tusD PE=3 SV=1 TUSD_SALCH - Sulfurtransferase tusD OS=Salmonella choleraesuis GN=tusD PE=3 SV=1 gi\|238913574 - gi\|238913574\|ref\|ZP_04657411.1\| hypothetical protein SentesTe_20928 [Salmonella enterica subsp. ente... TUSD_SALPA - Sulfurtransferase TusD OS=Salmonella paratyphi A GN=tusD PE=3 SV=1 TUSD_SALPK - Sulfurtransferase TusD OS=Salmonella paratyphi A (strain AKU_12601) GN=tusD PE=3 SV=1 gi\|199604477, gi... - gi\|200387379\|ref\|ZP_03213991.1\| sulfurtransferase TusD [Salmonella enterica subsp. enterica serovar ... TUSD_SALPC - Sulfurtransferase TusD OS=Salmonella paratyphi C (strain RKS4594) GN=tusD PE=3 SV=1	178.0	[0..4]	[131..1]
DSRE_ALLVD - Putative sulfurtransferase DsrE OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801... DSRE_CHRVI - Putative sulfurtransferase dsrE OS=Chromatium vinosum GN=dsrE PE=1 SV=1	177.0	[0..4]	[131..1]
gi\|253979330, gi... - gi\|254290023\|ref\|YP_003055771.1\| hypothetical protein ECD_03196 [Escherichia coli BL21(DE3)], gi\|253... TUSD_ECO8A - Sulfurtransferase TusD OS=Escherichia coli O8 (strain IAI1) GN=tusD PE=3 SV=1 gi\|242378871, gi... - gi\|251786598\|ref\|YP_003000902.1\| hypothetical protein B21_03147 [Escherichia coli BL21], gi\|24237887... TUSD_ECOSE - Sulfurtransferase TusD OS=Escherichia coli (strain SE11) GN=tusD PE=3 SV=1 gi\|253975174, gi... - gi\|254163273\|ref\|YP_003046381.1\| hypothetical protein ECB_03196 [Escherichia coli B str. REL606], gi... TUSD_ECOHS - Sulfurtransferase TusD OS=Escherichia coli O9:H4 (strain HS) GN=tusD PE=3 SV=1 TUSD_ECO24 - Sulfurtransferase TusD OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=tusD PE=3 SV=1	177.0	[0..4]	[131..1]
gi\|90109182, gi\|... - gi\|90109182\|pdb\|2D1P\|G Chain G, Crystal Structure Of Heterohexameric Tusbcd Proteins, Which Are Cruc...	177.0	[0..3]	[131..12]

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Predicted Domain #1

Region A:
Residues: [1-131]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALRYTLVV NGSVYGSQSA RTAYQFATAL IEKGHTLVSV FFYQDGVTNG TELTVPANDE  60
   61 FHLTKAWQQL AKQHNVRLET CVAAALRRGV VSQSEASQHG LLQHNLAEGF EQAGLGSLAE 120
  121 AMLTQDRVVQ F

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.30103
Match:	2hy5A
Description:	No description for 2hy5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits