YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39983818, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	195 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39983818, gi|....

Description	E-value	Query Range	Subject Range
gi\|83635468, gi\|... - gi\|83647425\|ref\|YP_435860.1\| segregation and condensation protein B [Hahella chejuensis KCTC 2396], ...	210.0	[0..3]	[194..6]
gi\|78223165, gi\|... - gi\|78223165\|ref\|YP_384912.1\| condensin subunit ScpB [Geobacter metallireducens GS-15], gi\|78194420\|g...	209.0	[0..1]	[193..1]
gi\|78048072, gi\|... - gi\|78048072\|ref\|YP_364247.1\| hypothetical protein XCV2516 [Xanthomonas campestris pv. vesicatoria st...	208.0	[0..4]	[188..31]
gi\|22994268, gi\|... - gi\|71276225\|ref\|ZP_00652504.1\| Conserved hypothetical protein 281 [Xylella fastidiosa Dixon], gi\|711... gi\|170730717, gi... - gi\|170730717\|ref\|YP_001776150.1\| putative transcriptional regulator [Xylella fastidiosa M12], gi\|167... gi\|71898736, gi\|... - gi\|71898736\|ref\|ZP_00680905.1\| Conserved hypothetical protein 281 [Xylella fastidiosa Ann-1], gi\|717...	208.0	[0..4]	[173..15]
gi\|15839043, gi\|... - gi\|9107648\|gb\|AAF85251.1\|AE004054_3 conserved hypothetical protein [Xylella fastidiosa 9a5c], gi\|158... gi\|11360842 - pir\|\|H82554 conserved hypothetical protein XF2452 [imported] - Xylella fastidiosa (strain 9a5c)	208.0	[0..4]	[173..15]
gi\|58426379, gi\|... - gi\|58581785\|ref\|YP_200801.1\| hypothetical protein XOO2162 [Xanthomonas oryzae pv. oryzae KACC10331],...	207.0	[0..4]	[189..31]
gi\|21108564, gi\|... - gi\|21243052\|ref\|NP_642634.1\| hypothetical protein XAC2317 [Xanthomonas axonopodis pv. citri str. 306...	207.0	[0..4]	[189..18]
SCPBL_COXBU - Segregation and condensation protein B homolog OS=Coxiella burnetii (strain RSA 493 / Nine Mile phas... gi\|154706487, gi... - gi\|94492136\|ref\|ZP_01299344.1\| hypothetical protein CburD_01000465 [Coxiella burnetii Dugway 7E9-12]... SCPBL_COXBU - Segregation and condensation protein B homolog OS=Coxiella burnetii GN=scpB PE=1 SV=1	207.0	[0..1]	[195..1]
gi\|28199351, gi\|... - gi\|28199351\|ref\|NP_779665.1\| hypothetical protein PD1470 [Xylella fastidiosa Temecula1], gi\|28057457... gi\|182632187, gi... - gi\|182682077\|ref\|YP_001830237.1\| segregation and condensation protein B [Xylella fastidiosa M23], gi...	207.0	[0..4]	[173..15]
gi\|22997293, gi\|... - gi\|71901987\|ref\|ZP_00684036.1\| Conserved hypothetical protein 281 [Xylella fastidiosa Ann-1], gi\|717...	206.0	[0..4]	[173..15]

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Predicted Domain #1

Region A:
Residues: [1-195]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRLESLVES LLFVSETPLS LDRLCSLLEE FDRAAIREAL DRLLERYGGE GRGIILAEVG  60
   61 GGFQFRTPAG NGDVIRRLTK ARPARFSQSA LETLAIIAYR QPVTRAEIEY LRGVDSGGVL 120
  121 KTLLEKKLIK ILGKRDIPGK PLIYGTTREF LELFALKDLK SLPSLREIRE LSETAVFEQQ 180
  181 EELPLAAPPE EGREP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.09691
Match:	2z99A
Description:	No description for 2z99A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits