YRC Public Data Repository - Protein Structure Prediction

Protein:	KTHY_GEOSL
Organism:	Geobacter sulfurreducens PCA
Length:	213 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KTHY_GEOSL.

Description	E-value	Query Range	Subject Range
gi\|48846896, gi\|... - gi\|78223521\|ref\|YP_385268.1\| thymidylate kinase [Geobacter metallireducens GS-15], gi\|78194776\|gb\|AB...	198.0	[0..1]	[211..1]
gi\|95133328, gi\|... - gi\|95930676\|ref\|ZP_01313410.1\| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684], gi\|95133328\|...	195.0	[0..1]	[211..1]
gi\|71916914, gi\|... - gi\|72163182\|ref\|YP_290839.1\| thymidylate kinase [Thermobifida fusca YX], gi\|71916914\|gb\|AAZ56816.1\| ...	194.0	[0..2]	[211..465]
gi\|113904572, gi... - gi\|145596534\|ref\|YP_001160831.1\| thymidylate kinase [Salinispora tropica CNB-440], gi\|145305871\|gb\|A...	193.0	[0..2]	[213..448]
KTHY_PELCD - Thymidylate kinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tmk PE=3 SV=1	193.0	[0..1]	[203..1]
KTHY_GEODF - Thymidylate kinase OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=tmk PE=3 SV=1	192.0	[0..1]	[211..1]
gi\|84326490 - gi\|84326490\|ref\|ZP_00974517.1\| COG0125: Thymidylate kinase [Pseudomonas aeruginosa 2192]	192.0	[0..2]	[210..3]
KTHY_PELPD - Thymidylate kinase OS=Pelobacter propionicus (strain DSM 2379) GN=tmk PE=3 SV=1	191.0	[0..1]	[211..1]
gi\|88912775, gi\|... - gi\|88931496\|ref\|ZP_01137190.1\| Thymidylate kinase [Acidothermus cellulolyticus 11B], gi\|88912775\|gb\|...	189.0	[0..2]	[211..465]
gi\|4539560, gi\|2... - gi\|4539560\|emb\|CAB38479.1\| integral membrane protein with kinase activity [Streptomyces coelicolor A... gi\|7481718 - pir\|\|T36663 protein kinase, transmembrane - Streptomyces coelicolor	187.0	[0..2]	[211..509]

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Predicted Domain #1

Region A:
Residues: [1-213]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYFITFEGI EGCGKTTQIK RAAQSLREAG HRVVVTREPG GCPIADDIRA ILLDAGNSAM  60
   61 VPTTELLLYA AARAQHVAEV IAPALAEGAV VLCDRFTDST LVYQGFGRNL DRDLIARLNT 120
  121 LAAGQIRPDL TILLDCPVAV GLARAAARIN SRQTNREERF ERESLLFHER VREGFLSLAG 180
  181 GEPHRFAVID GNDGVEATAT AVADVLLNRV PRR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.045757
Match:	2ccgA
Description:	No description for 2ccgA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits