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View Structure Prediction Details

Protein: ISPH_GEOSL
Organism: Geobacter sulfurreducens PCA
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISPH_GEOSL.

Description E-value Query
Range
Subject
Range
ISPH_PSEE4 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas entomophila (strain L48) GN=ispH P...
gi|95112630 - gi|95112630|emb|CAK17358.1| hydroxymethylbutenyl pyrophosphate reductase [Pseudomonas entomophila L4...
441.0 [0..1] [278..1]
gi|58425845, gi|... - gi|58581251|ref|YP_200267.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Xanthomonas oryzae ...
440.0 [0..1] [278..51]
ISPH_PSEF5 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BA...
439.0 [0..1] [278..1]
ISPH_PSEPG - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas putida (strain GB-1) GN=ispH PE=3 ...
ISPH_PSEPK - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas putida (strain KT2440) GN=ispH PE=...
438.0 [0..1] [278..1]
ISPH_PSE14 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas savastanoi pv. phaseolicola (strai...
438.0 [0..1] [278..1]
tr|E4RGR3|E4RGR3... - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas putida (strain BIRD-1) GN=ispH PE=...
tr|I7BI70|I7BI70... - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas putida (strain DOT-T1E) GN=ispH PE...
ISPH_PSEP1 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas putida (strain F1 / ATCC 700007) G...
437.0 [0..1] [278..1]
ISPH_PSEU2 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas syringae pv. syringae (strain B728...
436.0 [0..1] [278..1]
ISPH_HAHCH - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Hahella chejuensis (strain KCTC 2396) GN=ispH ...
436.0 [0..1] [279..1]
gi|126170626, gi... - gi|84317054|ref|ZP_00965510.1| COG0761: Penicillin tolerance protein [Pseudomonas aeruginosa C3719],...
gi|32423755|gb|A... - drug tolerance protein [Pseudomonas aeruginosa]
gi|194555530, gi... - gi|84323197|ref|ZP_00971273.1| COG0761: Penicillin tolerance protein [Pseudomonas aeruginosa 2192], ...
ISPH_PSEA8 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas aeruginosa (strain LESB58) GN=ispH...
ISPH_PSEAB - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=...
gi|32423755 - gi|32423755|gb|AAP81279.1| drug tolerance protein [Pseudomonas aeruginosa]
435.0 [0..1] [278..1]
gi|150959385, gi... - gi|94416152|ref|ZP_01295982.1| hypothetical protein PaerP_01001995 [Pseudomonas aeruginosa PA7], gi|...
435.0 [0..1] [281..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIVLAKRAG FCFGVKRATQ MAFEAAEKEG ETFTLGPIIH SPQVVQRLEG MGVKVLSDLE  60
   61 GIGNGTVIIR SHGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSAELEDAVR RQLEVVDATC PFVKKAQEHV KRLSHDGYTV VVVGDADHPE VQGIVSYAEG  60
   61 PVHVVGSGEE AARLPNMKKV GVVAQTTQSF ETLKNVVKEC LLKGGEIRVF NTICDATAVR 120
  121 QDEAKALARE VDCMIVIGGF NSANTKRLAE VCSELQPRTY HIETAQELDA SWFQGVERVG 180
  181 VTAGASTPKW LIDEVIERIQ EFDNKKKG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle