YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49177795, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	471 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49177795, gi|....

Description	E-value	Query Range	Subject Range
gi\|213967108, gi... - gi\|213967108\|ref\|ZP_03395257.1\| alginate biosynthesis protein AlgI [Pseudomonas syringae pv. tomato ... ALGI_PSESM - Probable poly(beta-D-mannuronate) O-acetylase OS=Pseudomonas syringae pv. tomato GN=algI PE=3 SV=1 ALGI_PSESM - Probable alginate O-acetylase AlgI OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algI PE=3 S...	0.0	[1..471]	[1..518]
gi\|66044308, gi\|... - gi\|66044308\|ref\|YP_234149.1\| membrane bound O-acyl transferase, MBOAT [Pseudomonas syringae pv. syri...	0.0	[1..471]	[1..518]
gi\|71558191, gi\|... - gi\|71737638\|ref\|YP_273378.1\| alginate biosynthesis protein AlgI [Pseudomonas syringae pv. phaseolico...	0.0	[1..471]	[1..518]
gi\|77457179, gi\|... - gi\|77457179\|ref\|YP_346684.1\| membrane bound O-acyl transferase, MBOAT [Pseudomonas fluorescens Pf0-1...	0.0	[1..471]	[1..521]
gi\|70728398, gi\|... - gi\|70728398\|ref\|YP_258147.1\| alginate biosynthesis protein AlgI [Pseudomonas fluorescens Pf-5], gi\|6...	0.0	[1..471]	[1..520]
ALGI_PSEPK - Probable alginate O-acetylase AlgI OS=Pseudomonas putida (strain KT2440) GN=algI PE=3 SV=1	0.0	[1..471]	[1..485]
gi\|82715032, gi\|... - gi\|82737911\|ref\|ZP_00900754.1\| alginate O-acetylation protein AlgI [Pseudomonas putida F1], gi\|82715...	0.0	[1..471]	[1..485]
gi\|104783509, gi... - gi\|95112496\|emb\|CAK17223.1\| alginate O-acetylation protein AlgI [Pseudomonas entomophila L48], gi\|10... gi\|95112496 - gi\|95112496\|emb\|CAK17223.1\| alginate O-acetylation protein AlgI [Pseudomonas entomophila L48]	0.0	[1..471]	[1..485]
gi\|226943222, gi... - gi\|226943222\|ref\|YP_002798295.1\| Alginate O-acetyl transferase [Azotobacter vinelandii DJ], gi\|22671... ALGI_AZOVI - Probable alginate O-acetylase AlgI OS=Azotobacter vinelandii GN=algI PE=3 SV=1	0.0	[1..471]	[1..499]
gi\|67156753 - gi\|67156753\|ref\|ZP_00418250.1\| Membrane bound O-acyl transferase, MBOAT [Azotobacter vinelandii AvOP... gi\|67085942, gi\|... - gi\|67156753\|ref\|ZP_00418250.1\| Membrane bound O-acyl transferase, MBOAT [Azotobacter vinelandii AvOP...	0.0	[2..471]	[1..498]

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Predicted Domain #1

Region A:
Residues: [1-138]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFSSSIFLF IFLPLVLFFY FIVRAELRNF VLLAFSLIFY AWGEPRFVLL MLFSILLNYC  60
   61 FGLLVHHYDK RKNMKVTFLI MAVIGNILLL SYFKYISFFT DILNNVLHLS IHVEPIPLPI 120
  121 GISFYTFQAM SYVIDIYR

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [139-216]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDGDVQKNPL NLALYISIFP QLIAGPIVRY NIVAEQIKTR IHSFERFTEG IQIFVLGLAK  60
   61 KILIANQVGF VADKIFAL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [217-388]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPSEMSVGTA WIGIIAYTLQ IYFDFSGYSD MAIGIGKMFG FDFPKNFNYP YISKSISEFW  60
   61 RRWHITLGSW FRDYIYIPLG GNRVSKLANY RNLFIVWGLT GLWHGASWTF IAWGLYYGFI 120
  121 ISIEKAGFEK ILNKLWKPLQ HAYVLLIVMI GWVFFRADNF AYSFQYLKAM FG

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.979	N/A	N/A	a.7.1	Spectrin repeat
View	Download	0.962	N/A	N/A	f.17.1	F1F0 ATP synthase subunit C
View	Download	0.931	N/A	N/A	a.7.1	Spectrin repeat
View	Download	0.903	N/A	N/A	a.7.5	Tubulin chaperone cofactor A
View	Download	0.886	N/A	N/A	a.7.1	Spectrin repeat

Predicted Domain #4

Region A:
Residues: [389-471]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDGQSFIDDN TMLYVHEYII VFLIAFIAAT PILKRMKNIL ELAPKTYMFT TQFVRPILLL  60
   61 TLFMISVMYL INSTYNPFIY FRF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits