YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261613, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	370 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261613, gi|....

Description	E-value	Query Range	Subject Range
gi\|89204945, gi\|... - gi\|89204945\|ref\|ZP_01183520.1\| Histidinol-phosphate aminotransferase [Bacillus weihenstephanensis KB...	2.0E-81	[1..370]	[1..370]
AAT_AQUAE - Aspartate aminotransferase OS=Aquifex aeolicus (strain VF5) GN=aspC PE=3 SV=1 AAT_AQUAE - Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1	2.0E-81	[1..361]	[1..393]
AAT1_BACSU - Aspartate aminotransferase OS=Bacillus subtilis GN=aspB PE=3 SV=1 AAT1_BACSU - Aspartate aminotransferase OS=Bacillus subtilis (strain 168) GN=aspB PE=3 SV=1 gi\|221314475 - gi\|221314475\|ref\|ZP_03596280.1\| aspartate aminotransferase [Bacillus subtilis subsp. subtilis str. N... gi\|221319397 - gi\|221319397\|ref\|ZP_03600691.1\| aspartate aminotransferase [Bacillus subtilis subsp. subtilis str. J... gi\|221323673 - gi\|221323673\|ref\|ZP_03604967.1\| aspartate aminotransferase [Bacillus subtilis subsp. subtilis str. S...	3.0E-81	[1..362]	[1..392]
HIS81_BACC1 - Histidinol-phosphate aminotransferase 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=hisC1 PE...	4.0E-81	[1..370]	[1..370]
gi\|22296085, gi\|... - gi\|22299900\|ref\|NP_683147.1\| aspartate aminotransferase [Thermosynechococcus elongatus BP-1], gi\|222...	1.0E-80	[1..362]	[1..387]
AAT_PYRAB - Aspartate aminotransferase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aspC PE=3 SV=1 AAT_PYRAB - Aspartate aminotransferase OS=Pyrococcus abyssi GN=aspC PE=3 SV=1	2.0E-80	[1..363]	[1..387]
gi\|18977625, gi\|... - gi\|18977625\|ref\|NP_578982.1\| aspartate aminotransferase [Pyrococcus furiosus DSM 3638], gi\|18893347\|...	2.0E-80	[1..363]	[1..387]
gi\|65318883 - gi\|65318883\|ref\|ZP_00391842.1\| COG0079: Histidinol-phosphate/aromatic aminotransferase and cobyric a...	2.0E-80	[1..370]	[7..376]
gi\|47565980, gi\|... - gi\|47565980\|ref\|ZP_00237018.1\| histidinol-phosphate aminotransferase [Bacillus cereus G9241], gi\|475...	3.0E-80	[1..370]	[1..370]
HIS81_BACHK - Histidinol-phosphate aminotransferase 1 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN... HIS81_BACHK - Histidinol-phosphate aminotransferase 1 OS=Bacillus thuringiensis subsp. konkukian GN=hisC1 PE=3 SV=... gi\|196030170, gi... - gi\|196039025\|ref\|ZP_03106332.1\| histidinol-phosphate aminotransferase [Bacillus cereus NVH0597-99], ...	4.0E-80	[1..370]	[1..370]

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Predicted Domain #1

Region A:
Residues: [1-370]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVKEQLLTL RAYVPGKNIE EVKREYGLSK IVKLASNENP FGCSARVTEA LTSLASQYAL  60
   61 YPDGHAFELR TQVAKHLGVK AEQLLFGSGL DEVIQMISRA LLHEGTNVVM ANPTFSQYHH 120
  121 HAVIEGAEVR EVSLKDGIHD LDAMLQQVDD QTKIVWICNP NNPTGTYVEK QKLLSFLESV 180
  181 PKSALVIMDE AYYEYAGAED YPQTLPLLEK YENLMVLRTF SKAYGLAAFR IGYAVGNTEL 240
  241 IGQLEVARLP FNTSTVAQSV ALAALEDQAF LQECVKKNEE GLHQYYAFCK EYNVFYYPSQ 300
  301 TNFIFLKLGI PGNEAFERLM KKGYIVRSGA AFGIDDGIRI TVGLKEENDE IIELLKELVN 360
  361 EQVQKEETYS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	80.0
Match:	1gd9A
Description:	Aromatic aminoacid aminotransferase, AroAT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
L-aspartate:2-oxoglutarate aminotransferase activity	5.03677961292867	bayes_pls_golite062009
catalytic activity	2.29878871754893	bayes_pls_golite062009
transferase activity	1.44093490824786	bayes_pls_golite062009
transferase activity, transferring nitrogenous groups	1.28316822767388	bayes_pls_golite062009
histidinol-phosphate transaminase activity	1.26617748508821	bayes_pls_golite062009
transaminase activity	1.24990480711889	bayes_pls_golite062009
5-aminolevulinate synthase activity	0.802089219704558	bayes_pls_golite062009
intramolecular transferase activity, transferring amino groups	0.659071155545801	bayes_pls_golite062009
binding	0.536634592992536	bayes_pls_golite062009
pyridoxal phosphate binding	0.16957228630576	bayes_pls_golite062009
vitamin B6 binding	0.16957228630576	bayes_pls_golite062009
cystathionine beta-lyase activity	0.0833010353195099	bayes_pls_golite062009
nucleic acid binding	0.013097682076602	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: