YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262584, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	304 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262584, gi|....

Description	E-value	Query Range	Subject Range
gi\|52142899, gi\|... - gi\|52142899\|ref\|YP_083931.1\| acetamidase [Bacillus cereus E33L], gi\|51976368\|gb\|AAU17918.1\| acetamid...	0.0	[1..304]	[1..304]
gi\|30020665, gi\|... - gi\|30020665\|ref\|NP_832296.1\| acetamidase [Bacillus cereus ATCC 14579], gi\|29896217\|gb\|AAP09497.1\| Ac...	0.0	[1..304]	[1..304]
gi\|42737598, gi\|... - gi\|42781675\|ref\|NP_978922.1\| acetamidase/formamidase family protein [Bacillus cereus ATCC 10987], gi...	0.0	[1..304]	[1..304]
gi\|49331239, gi\|... - gi\|49479683\|ref\|YP_036703.1\| acetamidase [Bacillus thuringiensis serovar konkukian str. 97-27], gi\|4...	0.0	[1..300]	[1..300]
gi\|47554616, gi\|... - gi\|47568722\|ref\|ZP_00239418.1\| formamidase [Bacillus cereus G9241], gi\|47554616\|gb\|EAL12971.1\| forma...	0.0	[1..304]	[1..304]
gi\|163940489, gi... - gi\|89209004\|ref\|ZP_01187475.1\| Acetamidase/Formamidase [Bacillus weihenstephanensis KBAB4], gi\|89153...	0.0	[1..304]	[1..304]
gi\|77954445, gi\|... - gi\|77954445\|ref\|ZP_00818839.1\| formamidase [Marinobacter aquaeolei VT8], gi\|77866659\|gb\|EAO97948.1\| ...	0.0	[5..299]	[16..387]
gi\|15612588, gi\|... - gi\|15612588\|ref\|NP_240891.1\| acetamidase [Bacillus halodurans C-125], gi\|10172637\|dbj\|BAB03744.1\| ac... gi\|25356086 - pir\|\|A83653 acetamidase BH0025 [imported] - Bacillus halodurans (strain C-125)	0.0	[1..298]	[1..298]
gi\|67094772, gi\|... - gi\|67657718\|ref\|ZP_00455095.1\| Formamidase [Burkholderia cenocepacia AU 1054], gi\|67094772\|gb\|EAM123... gi\|84354633, gi\|... - gi\|84354633\|ref\|ZP_00979535.1\| COG2421: Predicted acetamidase/formamidase [Burkholderia cenocepacia ... gi\|116650725, gi... - gi\|67663415\|ref\|ZP_00460697.1\| Formamidase [Burkholderia cenocepacia HI2424], gi\|67102967\|gb\|EAM2009...	0.0	[5..292]	[16..383]
gi\|90415644\|ref\|... - formamidase [marine gamma proteobacterium HTCC2207] gi\|90415644, gi\|... - gi\|90415644\|ref\|ZP_01223578.1\| formamidase [marine gamma proteobacterium HTCC2207], gi\|90332967\|gb\|E...	0.0	[5..292]	[16..383]

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Predicted Domain #1

Region A:
Residues: [1-304]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRIHKEHII YAMSSENKPC MEVEVGSRLI FETYDCFENQ IDSEDVAFQE LDWNRINPAT  60
   61 GPVYISGAEP GDILTVTIEK IQIAEQGVLT TGMNLGVMGE ELHENTVKIV PIHNKHVLFS 120
  121 NELQIPINPM IGVIGTAPKE ESISCGTPHD HGGNMDCKEI KEGTTLLLPV NVPGALLALG 180
  181 DLHAAMGDGE IGVSGVEVAG EVTVTVHIIK GKKWPLPMAI QKEKIMTLAS EQLLDDAANR 240
  241 AVRNMVTFLH EELKMSKADA TLLLSAAGDL KVCQVVDPLK TARMELSMDY VEKLGFNCSS 300
  301 FHIK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	107.0
Match:	2ii1A
Description:	No description for 2ii1A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits