YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|47529183, gi\|...
Organism:	Bacillus anthracis str. 'Ames Ancestor'
Length:	639 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47529183, gi|....

Description	E-value	Query Range	Subject Range
gi\|65321087 - gi\|65321087\|ref\|ZP_00394046.1\| COG1368: Phosphoglycerol transferase and related proteins, alkaline p...	0.0	[1..639]	[8..646]
gi\|49478934, gi\|... - gi\|49478934\|ref\|YP_037825.1\| sulfatase [Bacillus thuringiensis serovar konkukian str. 97-27], gi\|493...	0.0	[1..639]	[1..639]
gi\|42738774, gi\|... - gi\|42782847\|ref\|NP_980094.1\| sulfatase [Bacillus cereus ATCC 10987], gi\|42738774\|gb\|AAS42702.1\| sulf...	0.0	[1..639]	[1..639]
gi\|51975199, gi\|... - gi\|52141730\|ref\|YP_085099.1\| sulfatase [Bacillus cereus E33L], gi\|51975199\|gb\|AAU16749.1\| possible s...	0.0	[1..639]	[1..639]
gi\|163942914, gi... - gi\|89206626\|ref\|ZP_01185181.1\| Sulfatase [Bacillus weihenstephanensis KBAB4], gi\|89155393\|gb\|EAR7540...	0.0	[1..639]	[1..639]
gi\|30021857, gi\|... - gi\|30021857\|ref\|NP_833488.1\| phosphoglycerol transferase [Bacillus cereus ATCC 14579], gi\|29897413\|g...	0.0	[1..639]	[1..639]
gi\|89150735, gi\|... - gi\|89201148\|ref\|ZP_01179894.1\| Sulfatase [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|89150735\|...	0.0	[1..639]	[1..639]
gi\|47568262, gi\|... - gi\|47568262\|ref\|ZP_00238965.1\| phosphoglycerol transferase [Bacillus cereus G9241], gi\|47555090\|gb\|E...	0.0	[1..639]	[1..639]

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Predicted Domain #1

Region A:
Residues: [1-150]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKINLQMQ NISFVLIIAL ALWLKTYLIT RFSFDLKIES STQELILFIS PLAASLAFVG  60
   61 LALFATGEKR NYIALCINFL LTIILVGNVM FYDFYSDFVT LPVLGQTSNF GQLGGSIIEI 120
  121 LNYKIILAFV DIIFFFILLK KKALVFQTGR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [151-235]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTHPARFVYF LLTVGVFFAN LHLAEKERPE LLTRSFDRVM LVKNLGLYTH QVYDLTLQVK  60
   61 AGSQKALADS SKLQETENYV KANQS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.0
Match:	1ejjA
Description:	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3

Region A:
Residues: [236-639]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPNPNMFGAA KGKNVIVVTL ESLQTFLIGA KVNGEEVTPF LNEFINESYY FDNFFHQTGQ  60
   61 GKTSDSEFLI DTSLYPLNRG AVFFTHGNND YTATPEILRQ QGYFTSVFHA NNATFWNRNI 120
  121 MYSALGYDRY YNELDYKITP ETNLNWGLKD IEYFDQSVDI LKTVDQPFYA RFLTLTNHYP 180
  181 FTYDEDTKFI EPYDSGNGVF DRYIVTARYL DESIKKFIER LKAEGMYDDS IIVLYGDHYG 240
  241 ISEKHNRAMA QFLEKDQITE FDTLNLQRTP LYIHMPGQTE GETISKPTGQ IDIKPTILNL 300
  301 LGIDTTNDIR FGHDMFSNEY TGFVVLRDGS FITDKYAYKN NIFYDRITGE IVDLPKNEAQ 360
  361 ALIKRAQNEL RMSDKIIEGD LLRFSESNKI KTGEVQTKIK ETEK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.69897
Match:	2qzuA
Description:	No description for 2qzuA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits